RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 LRRC36Q1X8D7 754 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 TUBA3EQ6PEY2 450 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 KLHL17Q6TDP4 642 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 LRRC47Q8N1G4 583 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 LCORLQ8N3X6 602 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ZNF614Q8N883 585 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 BHMTQ93088 406 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ITFG2Q969R8 447 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SLC10A4Q96EP9 437 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 EEF2KMTQ96G04 330 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 CNDP1Q96KN2 507 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ACAP3Q96P50 834 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 NUP85Q9BW27 656 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ADD3Q9UEY8 706 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 SLC24A2Q9UI40 661 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 MATN2O00339 956 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 RPL5P46777 297 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 ERFP50548 548 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 USP11P51784 963 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SMYD4Q8IYR2 804 aaPredicted RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 E2F7Q96AV8 911 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 EYA1Q99502 592 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SPATA16Q9BXB7 569 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 METTL5Q9NRN9 209 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 WDR35Q9P2L0 1181 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 V9GYQ6 96 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 TNFRSF8P28908 595 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 HSD17B3P37058 310 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 GFPT1Q06210 699 aaPredicted RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 CTTNQ14247 550 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 TOMM20Q15388 145 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SPANXN2Q5MJ10 180 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 DGKHQ86XP1 1220 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 FNIP1Q8TF40 1166 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 AMACRQ9UHK6 382 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 GSTT1P30711 240 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 TOP3AQ13472 1001 aaPredicted RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 FIGNQ5HY92 759 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 IZUMO2Q6UXV1 221 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 TRIM48Q8IWZ4 208 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 RNPEPL1Q9HAU8 725 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 RIC8BQ9NVN3 520 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 HSPBP1Q9NZL4 362 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 RGS20O76081 388 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SNRPFP62306 86 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 ITGB3BPQ13352 177 aaPredicted RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 COG2Q14746 738 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 OR6P1Q8NGX9 317 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 SKA1Q96BD8 255 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ELMO2Q96JJ3 720 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 TIPINQ9BVW5 301 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 NGRNQ9NPE2 291 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 HDAC6Q9UBN7 1215 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 PSTPIP1O43586 416 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ATP6V1B1P15313 513 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 LRRC74BQ6ZQY2 392 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 WDR12Q9GZL7 423 aaKnown RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 KLHL3Q9UH77 587 aa8.72□□□□□ -1.01
CHD8-201ENST00000399982 PNMA8BQ9ULN7 279 aaPredicted RBP8.72□□□□□ -1.01
CHD8-201ENST00000399982 CLIC2O15247 247 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 IL12AP29459 219 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 AKT1P31749 480 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 GEMIN4P57678 1058 aaKnown RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 KCNH2Q12809 1159 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 OASLQ15646 514 aaKnown RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 EEPD1Q7L9B9 569 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 TINF2Q9BSI4 451 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 PZPP20742 1482 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 AP3D1O14617 1153 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 CCND2P30279 289 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 UBXN2AP68543 259 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 BTN3A2P78410 334 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 HEATR6Q6AI08 1181 aaKnown RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 MARK2Q7KZI7 788 aaKnown RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 NLRP10Q86W26 655 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 JAMLQ86YT9 394 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 TC2NQ8N9U0 490 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 ZNF577Q9BSK1 485 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 NAT9Q9BTE0 207 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 MAFFQ9ULX9 164 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 C2CD2Q9Y426 696 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 KDM5CP41229 1560 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 DENND3A2RUS2 1198 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 PSMD12O00232 456 aaPredicted RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 TAF4O00268 1085 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 PLOD1Q02809 727 aaPredicted RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 MACC1Q6ZN28 852 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 BNC2Q6ZN30 1099 aaPredicted RBP8.71□□□□□ -1.01
CHD8-201ENST00000399982 FAM45AQ8TCE6 357 aa8.71□□□□□ -1.01
CHD8-201ENST00000399982 SLC9A7Q96T83 725 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms