RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 GLIS1Q8NBF1 620 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 TCP10LQ8TDR4 215 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 CCDC124Q96CT7 223 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 TSSK1BQ9BXA7 367 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 FAM192AQ9GZU8 254 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 EBF3Q9H4W6 596 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 LGALS13Q9UHV8 139 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 SORBS3O60504 671 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 ARP10275 920 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 INHBCP55103 352 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 PDIA2Q13087 525 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 SATL1Q86VE3 508 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 TMEM117Q9H0C3 514 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 GTPBP10A4D1E9 387 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 RNASEH1O60930 286 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 MYL2P10916 166 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 GPS1Q13098 491 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 CCDC89Q8N998 374 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 CEP70Q8NHQ1 597 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 FAM151AQ8WW52 585 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 FAM84AQ96KN4 292 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 ZMYM2Q9UBW7 1377 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 KRT10P13645 584 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 ANPEPP15144 967 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 BFSP1Q12934 665 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 PTK6Q13882 451 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 MYLK4Q86YV6 388 aaPredicted RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 PYDC1Q8WXC3 89 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 PHF12Q96QT6 1004 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 SYT11Q9BT88 431 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 FHDC1Q9C0D6 1143 aaPredicted RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 MANSC1Q9H8J5 431 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 CCDC195A0A1B0GUA6 201 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 MEI4A8MW99 385 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 VIL1P09327 827 aaKnown RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 SREBF1P36956 1147 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 BTKQ06187 659 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 RASA3Q14644 834 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 KIF22Q14807 665 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 RGS9BPQ6ZS82 235 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 SHCBP1LQ9BZQ2 653 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 AGPAT3Q9NRZ7 376 aa17.96■□□□□ 0.47
PTPRA-205ENST00000399903 SMG5Q9UPR3 1016 aaKnown RBP17.96■□□□□ 0.47
PTPRA-205ENST00000399903 FAM237BA0A1B0GVD1 139 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 AP3B2Q13367 1082 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 PRKG1Q13976 671 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 RINT1Q6NUQ1 792 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 RIPOR1Q6ZS17 1223 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 SLFN12Q8IYM2 578 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ARHGAP18Q8N392 663 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 CPA5Q8WXQ8 436 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 GMLQ99445 158 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ECSITQ9BQ95 431 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 SAR1AQ9NR31 198 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 TMX2Q9Y320 296 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 TMEM150BA6NC51 233 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 NFIBO00712 420 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 FCHO1O14526 889 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 HNRNPCP07910 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPRA-205ENST00000399903 HARSP12081 509 aaKnown RBP17.95■□□□□ 0.46
PTPRA-205ENST00000399903 SSTR1P30872 391 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 EPHB1P54762 984 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 CMPK2Q5EBM0 449 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 LDHDQ86WU2 507 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ZSWIM2Q8NEG5 633 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 DENND1AQ8TEH3 1009 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 CRYGNQ8WXF5 182 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ACSF2Q96CM8 615 aaPredicted RBP17.95■□□□□ 0.46
PTPRA-205ENST00000399903 RILPQ96NA2 401 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 PARVGQ9HBI0 331 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 WRAP73Q9P2S5 460 aaPredicted RBP17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ZNF212Q9UDV6 495 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 BGNP21810 368 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 PPP3CAQ08209 521 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ZNF568Q3ZCX4 644 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 LPCAT4Q643R3 524 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 MARK2Q7KZI7 788 aaKnown RBP17.95■□□□□ 0.46
PTPRA-205ENST00000399903 LCA5Q86VQ0 697 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 ARHGAP24Q8N264 748 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 CCDC110Q8TBZ0 833 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 NMUR2Q9GZQ4 415 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 C10orf88Q9H8K7 445 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 PPM1HQ9ULR3 514 aa17.95■□□□□ 0.46
PTPRA-205ENST00000399903 FRMPD4Q14CM0 1322 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 FSCN2O14926 492 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 POLR2MP0CAP2 368 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 ARSEP51690 589 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 FKBP1AP62942 108 aaKnown RBP17.94■□□□□ 0.46
PTPRA-205ENST00000399903 CTC1Q2NKJ3 1217 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 HYIQ5T013 277 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 IL31RAQ8NI17 732 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 EPS8L1Q8TE68 723 aa17.94■□□□□ 0.46
PTPRA-205ENST00000399903 CD101Q93033 1021 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms