RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SPARCL1Q14515 664 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 PTGISQ16647 500 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 CDKL3Q8IVW4 592 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.57
CACNA1C-210ENST00000399606 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 EEF2KO00418 725 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 ATP5HO75947 161 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 PGK2P07205 417 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 THOP1P52888 689 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 SNAP47Q5SQN1 464 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 DDI2Q5TDH0 399 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 CHST13Q8NET6 341 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 IFRD1O00458 451 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 B3GAT3O94766 335 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 YWHAQP27348 245 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 QRICH1Q2TAL8 776 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 TMEM47Q9BQJ4 181 aa11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 FAM32AQ9Y421 112 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-210ENST00000399606 TEX28O15482 410 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 OLFM3Q96PB7 478 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 RASSF9O75901 435 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 FTCDO95954 541 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CCDC149Q6ZUS6 474 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 DGKHQ86XP1 1220 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 MAGED4Q96JG8 741 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 GPR108Q9NPR9 543 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 POLE3Q9NRF9 147 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 ADA2Q9NZK5 511 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 TDRKHQ9Y2W6 561 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CLMNQ96JQ2 1002 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 REXO4Q9GZR2 422 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 KLHL25Q9H0H3 589 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CPDO75976 1380 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 LMTK2Q8IWU2 1503 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 AK9Q5TCS8 1911 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 RNF103-CHMP3A0A140T963 221 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 POTEMA6NI47 508 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 NCAM1P13591 858 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 MIB1Q86YT6 1006 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 HBP1O60381 514 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 NMT2O60551 498 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CXCR5P32302 372 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 RGS4P49798 205 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CDH6P55285 790 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 NRG3P56975 720 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIM71Q2Q1W2 868 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 C12orf50Q8NA57 414 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 SAYSD1Q9NPB0 183 aa11.45□□□□□ -0.58
CACNA1C-210ENST00000399606 CHRM3P20309 590 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ITGA3P26006 1051 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NR5A1Q13285 461 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ELAC2Q9BQ52 826 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 EIF2AK1Q9BQI3 630 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 MYO1GB0I1T2 1018 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 TRIM25Q14258 630 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 GSTA3Q16772 222 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 RABGAP1LQ5R372 815 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ANO5Q75V66 913 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 FMO2Q99518 471 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 C1QTNF7Q9BXJ2 289 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 NFICP08651 508 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 GPC1P35052 558 aa11.44□□□□□ -0.58
CACNA1C-210ENST00000399606 CASP8Q14790 479 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms