RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TOM1L1O75674 476 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 HARSP12081 509 aaKnown RBP19.6■□□□□ 0.73
UFD1-202ENST00000399523 ARSAP15289 507 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 ATF6P18850 670 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 NOLC1Q14978 699 aaKnown RBP eCLIP19.6■□□□□ 0.739e-7■■□□□ 13.8
UFD1-202ENST00000399523 VEPH1Q14D04 833 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 SEZ6Q53EL9 994 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 USP39Q53GS9 565 aaKnown RBP19.6■□□□□ 0.73
UFD1-202ENST00000399523 HAUS3Q68CZ6 603 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 NAIF1Q69YI7 327 aaPredicted RBP19.6■□□□□ 0.73
UFD1-202ENST00000399523 KIAA1211LQ6NV74 962 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 ARMCX5Q6P1M9 558 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 DSTYKQ6XUX3 929 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 CYP2U1Q7Z449 544 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 EXOC4Q96A65 974 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 KMT5AQ9NQR1 393 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 EVLQ9UI08 416 aaPredicted RBP19.6■□□□□ 0.73
UFD1-202ENST00000399523 ADAMTS20P59510 1910 aa19.6■□□□□ 0.73
UFD1-202ENST00000399523 ACACAQ13085 2346 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 HELZ2Q9BYK8 2649 aaKnown RBP19.59■□□□□ 0.73
UFD1-202ENST00000399523 TTC26A0AVF1 554 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 GJA4P35212 333 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 AVPR1AP37288 418 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 DGKEP52429 567 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 PDGFRLQ15198 375 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 UAP1L1Q3KQV9 507 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 TMEM150AQ86TG1 271 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 KIF9Q9HAQ2 790 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 TDP1Q9NUW8 608 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 KLK13Q9UKR3 277 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 UBQLN1Q9UMX0 589 aaKnown RBP19.59■□□□□ 0.73
UFD1-202ENST00000399523 INVSQ9Y283 1065 aa19.59■□□□□ 0.73
UFD1-202ENST00000399523 FAM221BA6H8Z2 402 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 CAPNS1P04632 268 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 OR52Z1P0C646 297 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 CXCL8P10145 99 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 DDX6P26196 483 aaKnown RBP eCLIP19.58■□□□□ 0.72
UFD1-202ENST00000399523 U2AF2P26368 475 aaKnown RBP eCLIP19.58■□□□□ 0.728e-9■■■■■ 33.2
UFD1-202ENST00000399523 CCT6AP40227 531 aaKnown RBP19.58■□□□□ 0.72
UFD1-202ENST00000399523 SPAG1Q07617 926 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 BFSP1Q12934 665 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 CENPQQ7L2Z9 268 aaPredicted RBP19.58■□□□□ 0.72
UFD1-202ENST00000399523 RASSF3Q86WH2 238 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 MAB21L3Q8N8X9 362 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 OR10T2Q8NGX3 314 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 RIN3Q8TB24 985 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 COL26A1Q96A83 441 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 KIF12Q96FN5 646 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 SEPT5Q99719 369 aaPredicted RBP19.58■□□□□ 0.72
UFD1-202ENST00000399523 NTPCRQ9BSD7 190 aaKnown RBP19.58■□□□□ 0.72
UFD1-202ENST00000399523 SLC32A1Q9H598 525 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 C17orf75Q9HAS0 396 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 ANKFY1Q9P2R3 1169 aa19.58■□□□□ 0.72
UFD1-202ENST00000399523 PTPRDP23468 1912 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 ANK1P16157 1881 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 HIP1RO75146 1068 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 CLTAP09496 248 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 BCKDHBP21953 392 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 NLRP12P59046 1061 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 LILRA4P59901 499 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 MCL1Q07820 350 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 LMAN2Q12907 356 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 MAPK7Q13164 816 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 MGAT5BQ3V5L5 792 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 CC2D1AQ6P1N0 951 aaPredicted RBP19.57■□□□□ 0.72
UFD1-202ENST00000399523 TSTD1Q8NFU3 115 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 KIAA1024Q9UPX6 916 aa19.57■□□□□ 0.72
UFD1-202ENST00000399523 UPK3BL1B0FP48 263 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 UPK3BL2E5RIL1 263 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 SLC16A4O15374 487 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 F11P03951 625 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 PAX3P23760 479 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 ORC2Q13416 577 aaPredicted RBP19.56■□□□□ 0.72
UFD1-202ENST00000399523 ZNF268Q14587 947 aaPredicted RBP19.56■□□□□ 0.72
UFD1-202ENST00000399523 TAF12Q16514 161 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 SLC39A12Q504Y0 691 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 ZPBP2Q6X784 338 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 PIP4P1Q86T03 277 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 PROSER1Q86XN7 944 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 CPA6Q8N4T0 437 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 PIGKQ92643 395 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 CD101Q93033 1021 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 SENP8Q96LD8 212 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
UFD1-202ENST00000399523 ZCWPW1Q9H0M4 648 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 ECT2Q9H8V3 914 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 DDX19AQ9NUU7 478 aaKnown RBP19.56■□□□□ 0.72
UFD1-202ENST00000399523 OBSL1O75147 1896 aa19.56■□□□□ 0.72
UFD1-202ENST00000399523 PPEF2O14830 753 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 CLDN3O15551 220 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 APC2O95996 2303 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 CYP11A1P05108 521 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 ODC1P11926 461 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 HMGA1P17096 107 aaKnown RBP19.55■□□□□ 0.72
UFD1-202ENST00000399523 NMT1P30419 496 aaKnown RBP19.55■□□□□ 0.72
UFD1-202ENST00000399523 GUCY2FP51841 1108 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 STRN3Q13033 797 aa19.55■□□□□ 0.72
UFD1-202ENST00000399523 SOWAHCQ53LP3 525 aaPredicted RBP19.55■□□□□ 0.72
UFD1-202ENST00000399523 MON1AQ86VX9 555 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms