RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ATF2P15336 505 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 GARTP22102 1010 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 GUCY2FP51841 1108 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 LILRA4P59901 499 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 ASIC1P78348 528 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 ROR1Q01973 937 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 YWHAHQ04917 246 aaPredicted RBP12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 TPGS2Q68CL5 300 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 CNNM4Q6P4Q7 775 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 CRELD2Q6UXH1 353 aaPredicted RBP12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 USP37Q86T82 979 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 TMEM130Q8N3G9 435 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 FAM122AQ96E09 287 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 FAM213AQ9BRX8 229 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 FGFBP2Q9BYJ0 223 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 KCNK12Q9HB15 430 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 IGSF9Q9P2J2 1179 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
SMIM11A-201ENST00000399292 WDR27A2RRH5 827 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 PIRO00625 290 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 PRRG1O14668 218 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 OAZ2O95190 189 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 AARSP49588 968 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 KRT85P78386 507 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 NR1H3Q13133 447 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 TDGQ13569 410 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 C9orf57Q5W0N0 161 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 PRICKLE2Q7Z3G6 844 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 HPS3Q969F9 1004 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 MYADMQ96S97 322 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 OXCT2Q9BYC2 517 aaPredicted RBP12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 DPP3Q9NY33 737 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 MAFFQ9ULX9 164 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 ZDHHC9Q9Y397 364 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 ATP6V1DQ9Y5K8 247 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 TIMM13Q9Y5L4 95 aaPredicted RBP12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
SMIM11A-201ENST00000399292 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 PPEF2O14830 753 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 EXTL3O43909 919 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 LRG1P02750 347 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 POU2F2P09086 479 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 LAMP2P13473 410 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 CMA1P23946 247 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 GPC1P35052 558 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 AFMP43652 599 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 BECN1Q14457 450 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 UNC13DQ70J99 1090 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 TCEAL8Q8IYN2 117 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 ZNF507Q8TCN5 953 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 NOC3LQ8WTT2 800 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 NXPE3Q969Y0 559 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 SAAL1Q96ER3 474 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 SENP8Q96LD8 212 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 CBWD1Q9BRT8 395 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 PCIF1Q9H4Z3 704 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 CYP4F11Q9HBI6 524 aa12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 CUEDC1Q9NWM3 386 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 ZFP37Q9Y6Q3 630 aaPredicted RBP12.72□□□□□ -0.37
SMIM11A-201ENST00000399292 A0A1B0GVL5 298 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 OR6C75A6NL08 312 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 GOLGA8JA6NMD2 632 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 SLFN14P0C7P3 912 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 ODC1P11926 461 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 CPB1P15086 417 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 PTPN2P17706 415 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 TYMPP19971 482 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 NTHL1P78549 312 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 ADCY1Q08828 1119 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 OVOS1Q6IE37 1185 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 EPM2AIP1Q7L775 607 aaPredicted RBP12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 BRSK2Q8IWQ3 736 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 SUGP1Q8IWZ8 645 aaKnown RBP12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 GPD1LQ8N335 351 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 GLIS3Q8NEA6 775 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.37
SMIM11A-201ENST00000399292 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms