RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 SNX25Q9H3E2 840 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 IGSF9Q9P2J2 1179 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 LIMD1Q9UGP4 676 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 CDH9Q9ULB4 789 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 PCDHB5Q9Y5E4 795 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 TRIP11Q15643 1979 aa20.15■□□□□ 0.82
COLCA2-201ENST00000398035 PPP1R3GB7ZBB8 358 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 BIN1O00499 593 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 LAMP2P13473 410 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 INTS6LQ5JSJ4 861 aaKnown RBP20.14■□□□□ 0.81
COLCA2-201ENST00000398035 KRT39Q6A163 491 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 FILIP1Q7Z7B0 1213 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 LRRTM3Q86VH5 581 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 TMEM209Q96SK2 561 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 CLSTN2Q9H4D0 955 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 TMEM8AQ9HCN3 771 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 ABCB6Q9NP58 842 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 LMBRD1Q9NUN5 540 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 NXF1Q9UBU9 619 aaKnown RBP20.14■□□□□ 0.81
COLCA2-201ENST00000398035 MRPS23Q9Y3D9 190 aaKnown RBP20.14■□□□□ 0.81
COLCA2-201ENST00000398035 YIPF1Q9Y548 306 aa20.14■□□□□ 0.81
COLCA2-201ENST00000398035 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
COLCA2-201ENST00000398035 FGF19O95750 216 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 RHOP08100 348 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 BMP6P22004 513 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 C4orf50Q6ZRC1 276 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 PDZD4Q76G19 769 aaPredicted RBP20.13■□□□□ 0.81
COLCA2-201ENST00000398035 FEZF2Q8TBJ5 459 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 FUBP3Q96I24 572 aaKnown RBP eCLIP20.13■□□□□ 0.81
COLCA2-201ENST00000398035 CORO1BQ9BR76 489 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 GDE1Q9NZC3 331 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 ARMCX3Q9UH62 379 aaPredicted RBP20.13■□□□□ 0.81
COLCA2-201ENST00000398035 MUTYHQ9UIF7 546 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 CDH7Q9ULB5 785 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 SORCS3Q9UPU3 1222 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 SLC27A5Q9Y2P5 690 aa20.13■□□□□ 0.81
COLCA2-201ENST00000398035 CUL9Q8IWT3 2517 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 CLSTN1O94985 981 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 VNN1O95497 513 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 VNN2O95498 520 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 GNA14O95837 355 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 CD44P16070 742 aaKnown RBP20.12■□□□□ 0.81
COLCA2-201ENST00000398035 TRIM21P19474 475 aaKnown RBP20.12■□□□□ 0.81
COLCA2-201ENST00000398035 GCLMP48507 274 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 PMS1P54277 932 aaKnown RBP20.12■□□□□ 0.81
COLCA2-201ENST00000398035 PAK1Q13153 545 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 VEPH1Q14D04 833 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 PTPN21Q16825 1174 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 MGAT5BQ3V5L5 792 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 C1orf220Q5T0J3 134 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 KLHL10Q6JEL2 608 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 FAM171BQ6P995 826 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 GET4Q7L5D6 327 aaPredicted RBP20.12■□□□□ 0.81
COLCA2-201ENST00000398035 FRMD5Q7Z6J6 570 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 UBALD2Q8IYN6 164 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 MLKLQ8NB16 471 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 OR6B3Q8NGW1 331 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 KBTBD7Q8WVZ9 684 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 EDAQ92838 391 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 EEF2KMTQ96G04 330 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 FAXDC2Q96IV6 333 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 ASAH2Q9NR71 780 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 CEP72Q9P209 647 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 GTF3C4Q9UKN8 822 aa20.12■□□□□ 0.81
COLCA2-201ENST00000398035 ASS1P00966 412 aaKnown RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 HAPLN1P10915 354 aaPredicted RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 PIK3CAP42336 1068 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 RPL10AP62906 217 aaKnown RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 PPP3CAQ08209 521 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 TAF12Q16514 161 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 CFAP221Q4G0U5 840 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 SPATA2LQ8IUW3 424 aaPredicted RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 FGF13Q92913 245 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 SEPT5Q99719 369 aaPredicted RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 GPR88Q9GZN0 384 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 DNAI2Q9GZS0 605 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 NUP62CLQ9H1M0 184 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 EPHX3Q9H6B9 360 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 HCFC1R1Q9NWW0 138 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 ABI2Q9NYB9 513 aaPredicted RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 TCF20Q9UGU0 1960 aaKnown RBP20.11■□□□□ 0.81
COLCA2-201ENST00000398035 NCOR1O75376 2440 aa20.11■□□□□ 0.81
COLCA2-201ENST00000398035 N4BP1O75113 896 aaKnown RBP20.1■□□□□ 0.81
COLCA2-201ENST00000398035 HLA-DRAP01903 254 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 LMO2P25791 158 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 EPHA5P54756 1037 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 NTHL1P78549 312 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 MTMR3Q13615 1198 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 TTI2Q6NXR4 508 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 DNAJB7Q7Z6W7 309 aaPredicted RBP20.1■□□□□ 0.81
COLCA2-201ENST00000398035 OSTM1Q86WC4 334 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 FAM200AQ8TCP9 573 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 KHSRPQ92945 711 aaKnown RBP eCLIP20.1■□□□□ 0.81
COLCA2-201ENST00000398035 PSMG2Q969U7 264 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 MYADMQ96S97 322 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 SYT15Q9BQS2 421 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 CRISPLD1Q9H336 500 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 KCNK12Q9HB15 430 aa20.1■□□□□ 0.81
COLCA2-201ENST00000398035 PDCD11Q14690 1871 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms