RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 KCNA1Q09470 495 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 LRRC32Q14392 662 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 SYCP3Q8IZU3 236 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 DCLK2Q8N568 766 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 TASP1Q9H6P5 420 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 ABI2Q9NYB9 513 aaPredicted RBP15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 RBAKQ9NYW8 714 aaPredicted RBP15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 MORC2Q9Y6X9 1032 aaPredicted RBP15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 GPR179Q6PRD1 2367 aa15.4■□□□□ 0.06
SNRNP25-203ENST00000397876 CACNA1AO00555 2505 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 PRAMEF12O95522 483 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 HAPLN1P10915 354 aaPredicted RBP15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 GARTP22102 1010 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 WEE1P30291 646 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 CDR1P51861 262 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 CYP4F8P98187 520 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 MAMSTRQ6ZN01 415 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 GPIHBP1Q8IV16 184 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 CACTINQ8WUQ7 758 aaKnown RBP15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 RMDN1Q96DB5 314 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 PCDHB5Q9Y5E4 795 aa15.39■□□□□ 0.05
SNRNP25-203ENST00000397876 FRMD3A2A2Y4 597 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 SPECC1L-ADORA2AF8WAN1 911 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 ITGB3P05106 788 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 CHRNB1P11230 501 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 SOX9P48436 509 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 CASP5P51878 434 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 SLC39A14Q15043 492 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 NFE2Q16621 373 aaPredicted RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 LRRTM3Q86VH5 581 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 RALGPS2Q86X27 583 aaPredicted RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 CCDC65Q8IXS2 484 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 GPR161Q8N6U8 529 aaKnown RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 LRRC52Q8N7C0 313 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 NOC3LQ8WTT2 800 aaKnown RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 TMEM206Q9H813 350 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 IL21Q9HBE4 155 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 PANK4Q9NVE7 773 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 THG1LQ9NWX6 298 aaKnown RBP15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 ITGA11Q9UKX5 1188 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 AGAP1Q9UPQ3 857 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 MTMR6Q9Y217 621 aa15.38■□□□□ 0.05
SNRNP25-203ENST00000397876 MYBPHLA2RUH7 354 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 EXTL3O43909 919 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 HUS1O60921 280 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 TDGF1P13385 188 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 CTHP32929 405 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 CXCL12P48061 93 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 WNT7BP56706 349 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 MYL7Q01449 175 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 BFSP1Q12934 665 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 PUM1Q14671 1186 aaKnown RBP eCLIP15.37■□□□□ 0.052e-10■□□□□ 9
SNRNP25-203ENST00000397876 STK38Q15208 465 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 DGKKQ5KSL6 1271 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 TMEM86AQ8N2M4 240 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 PDCL2Q8N4E4 241 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 SPEM1Q8N4L4 309 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 PDILTQ8N807 584 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 LRRC3BQ96PB8 259 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 CBWD1Q9BRT8 395 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 PANK2Q9BZ23 570 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 RAB23Q9ULC3 237 aa15.37■□□□□ 0.05
SNRNP25-203ENST00000397876 FRYLO94915 3013 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 CEP250Q9BV73 2442 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 A0A087X0B3 334 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 GOLGA8IPA6NC78 632 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 GOLGA8JA6NMD2 632 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 KIAA0391O15091 583 aaKnown RBP15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 STX6O43752 255 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 PRPF40AO75400 957 aaKnown RBP15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 KRT19P08727 400 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 TMEM191BP0C7N4 346 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 AVPR1AP37288 418 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 SATB1Q01826 763 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 TXNDC11Q6PKC3 985 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 DGLUCYQ7Z3D6 616 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 GPD1LQ8N335 351 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 ZSWIM2Q8NEG5 633 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 TTC8Q8TAM2 541 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 ACBD6Q9BR61 282 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 PI4K2AQ9BTU6 479 aa15.36■□□□□ 0.05
SNRNP25-203ENST00000397876 FGFBP2Q9BYJ0 223 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms