RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 INO80BQ9C086 356 aaPredicted RBP19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MLXIPLQ9NP71 852 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 A0A1B0GUA9 196 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GOLGA6L7A0A1B0GV03 622 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TCRBV5S1A1TA0A578 114 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SOCS7O14512 581 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DDNO94850 711 aaPredicted RBP19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ETS1P14921 441 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 KLRC2P26717 231 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MXD4Q14582 209 aaPredicted RBP19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TMEM132AQ24JP5 1023 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MOB2Q70IA6 237 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 FBXO16Q8IX29 292 aaPredicted RBP19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TMEM192Q8IY95 271 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TMEM35BQ8NCS4 154 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 FAM167AQ96KS9 214 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 FGD4Q96M96 766 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TJP2Q9UDY2 1190 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 POLIQ9UNA4 740 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CNMDO75829 334 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CALB1P05937 261 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RAP1GAPP47736 663 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CAV1Q03135 178 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ORC1Q13415 861 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 Q3C1V9 767 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EEF1DP3Q658K8 133 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SERPINB12Q96P63 405 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZNF148Q9UQR1 794 aa19.38■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CSDE1O75534 798 aaKnown RBP19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 VIMP08670 466 aaKnown RBP19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 KRT19P08727 400 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CETPP11597 493 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PSMC4P43686 418 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ASPAP45381 313 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PLCB4Q15147 1175 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 WDR78Q5VTH9 848 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ERICH1Q86X53 443 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CCDC13Q8IYE1 715 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RCOR2Q8IZ40 523 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZNF483Q8TF39 744 aaPredicted RBP19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TCP11Q8WWU5 503 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SPATA33Q96N06 139 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 XYLT2Q9H1B5 865 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MCM3APO60318 1980 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DNM1LO00429 736 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LIASO43766 372 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CLCN3P51790 818 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ADCY1Q08828 1119 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GRIK3Q13003 919 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GRM1Q13255 1194 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ZKSCAN8Q15776 578 aaPredicted RBP19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CELF3Q5SZQ8 465 aaKnown RBP19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CYP4X1Q8N118 509 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SGIP1Q9BQI5 828 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MINDY3Q9H8M7 445 aa19.37■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TMEM120BA0PK00 339 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GOLGA8SH3BPF8 625 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CETN2P41208 172 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 NAA25Q14CX7 972 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ATF7IP2Q5U623 682 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CYP4F22Q6NT55 531 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PPP1R2P3Q6NXS1 205 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RBM41Q96IZ5 413 aaKnown RBP19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 IGKV6-21A0A0C4DH24 114 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EME2A4GXA9 379 aaPredicted RBP19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LSM8O95777 96 aaKnown RBP19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CXCL8P10145 99 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CD19P15391 556 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CDH8P55286 799 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 HP1BP3Q5SSJ5 553 aaPredicted RBP19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 AP1ARQ63HQ0 302 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DENND1BQ6P3S1 775 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MPZL3Q6UWV2 235 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 VSTM1Q6UX27 236 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SPOCD1Q6ZMY3 1216 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TAX1BP1Q86VP1 789 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ANKRD42Q8N9B4 389 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PPP1R16BQ96T49 567 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ELAC2Q9BQ52 826 aaKnown RBP19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 KCNK9Q9NPC2 374 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 MGAMO43451 1857 aa19.36■□□□□ 0.69
CHRFAM7A-202ENST00000397827 A0A0G2JMZ2 1700 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LRRD1A4D1F6 860 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 TJP3O95049 919 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 IQCF3P0C7M6 154 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 HIBCHQ6NVY1 386 aaPredicted RBP19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 DYDC1Q8WWB3 177 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 RBM15Q96T37 977 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 EVPLQ92817 2033 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ITGBL1O95965 494 aaPredicted RBP19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 GCKP35557 465 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 LACTBP83111 547 aaPredicted RBP19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SMTNL2Q2TAL5 461 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PPP1R15BQ5SWA1 713 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 CCDC197Q8NCU1 140 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 ARMC2Q8NEN0 867 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PTPRHQ9HD43 1115 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 PDGFCQ9NRA1 345 aa19.35■□□□□ 0.69
CHRFAM7A-202ENST00000397827 SAE1Q9UBE0 346 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms