RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PRDM5Q9NQX1 630 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-205ENST00000397761 NLRC5Q86WI3 1866 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 TMCO5BA8MYB1 307 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 O00370 1275 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 B3GAT3O94766 335 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 CD19P15391 556 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 GNL1P36915 607 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 CNGA2Q16280 664 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 TIGD5Q53EQ6 642 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 PHF13Q86YI8 300 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 ABI1Q8IZP0 508 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 OR6B3Q8NGW1 331 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 SECISBP2LQ93073 1101 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 MRPL9Q9BYD2 267 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 KIAA1671Q9BY89 1806 aa20.71■□□□□ 0.91
PDLIM2-205ENST00000397761 EFCAB14O75071 495 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 CYP11A1P05108 521 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 ORC1Q13415 861 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 STILQ15468 1287 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 SGO2Q562F6 1265 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 WSCD1Q658N2 575 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 LCLAT1Q6UWP7 414 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 SYT10Q6XYQ8 523 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 OSTM1Q86WC4 334 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 CTNNBL1Q8WYA6 563 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 RFFLQ8WZ73 363 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 VCPIP1Q96JH7 1222 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 SUSD3Q96L08 255 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 THAP2Q9H0W7 228 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 SNX25Q9H3E2 840 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 PAXBP1Q9Y5B6 917 aa20.7■□□□□ 0.9
PDLIM2-205ENST00000397761 MACROD2A1Z1Q3 448 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 KIF4AO95239 1232 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 GATMP50440 423 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 HADHBP55084 474 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 RNASELQ05823 741 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ZNF569Q5MCW4 686 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 NAA35Q5VZE5 725 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ARHGAP17Q68EM7 881 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 MON1BQ7L1V2 547 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 MCOLN2Q8IZK6 566 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 WDTC1Q8N5D0 677 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 RABGGTAQ92696 567 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 HEXIM2Q96MH2 286 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 PDCL3Q9H2J4 239 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 NRDE2Q9H7Z3 1164 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 GTF3C4Q9UKN8 822 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 PCDHGC5Q9Y5F6 944 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 A8MXQ7 604 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 MTA2O94776 668 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 BAIAP3O94812 1187 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 CYP1A2P05177 515 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ITGB1P05556 798 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 LMO2P25791 158 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 NSFP46459 744 aaKnown RBP20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 LHX1P48742 406 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 GPC5P78333 572 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 PTP4A2Q12974 167 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 DSTYKQ6XUX3 929 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ACOT1Q86TX2 421 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 SLC35F6Q8N357 371 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 TMEM35BQ8NCS4 154 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 TRIM58Q8NG06 486 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 CPA5Q8WXQ8 436 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 TOP1MTQ969P6 601 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ARHGEF26Q96DR7 871 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 TRIM11Q96F44 468 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 NOX5Q96PH1 765 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 DNAI2Q9GZS0 605 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 IL23AQ9NPF7 189 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 DNAJB4Q9UDY4 337 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 DNAI1Q9UI46 699 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 CAPN6Q9Y6Q1 641 aa20.69■□□□□ 0.9
PDLIM2-205ENST00000397761 ARHGEF37A1IGU5 675 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 DGKIO75912 1065 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 MOCS3O95396 460 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 MYBL1P10243 752 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 ODC1P11926 461 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 ABCB4P21439 1286 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 MMP8P22894 467 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 C1QBPQ07021 282 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 PKDCCQ504Y2 493 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 DENND1BQ6P3S1 775 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 PASD1Q8IV76 773 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 RHOT2Q8IXI1 618 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 KIF18AQ8NI77 898 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 TNIP3Q96KP6 325 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 CALR3Q96L12 384 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 FAM193BQ96PV7 902 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 TMEM175Q9BSA9 504 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 DPEP3Q9H4B8 488 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 RC3H2Q9HBD1 1191 aaKnown RBP20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 AVENQ9NQS1 362 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 DSEQ9UL01 958 aa20.68■□□□□ 0.9
PDLIM2-205ENST00000397761 HCRTO43612 131 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 MICAL2O94851 1124 aa20.67■□□□□ 0.9
PDLIM2-205ENST00000397761 TYMPP19971 482 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms