RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 PSTPIP1O43586 416 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 ZSCAN5DPP0CG00 497 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 Q4G0T1 1027 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 ZNF677Q86XU0 584 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 ACTL9Q8TC94 416 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 PPCSQ9HAB8 311 aa16.55■□□□□ 0.24
ATP2A3-205ENST00000397041 A8MXQ7 604 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 EXTL3O43909 919 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 MCF2P10911 925 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 PTPN4P29074 926 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SGSM1Q2NKQ1 1148 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 KRT27Q7Z3Y8 459 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 EXOC8Q8IYI6 725 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 EMC1Q8N766 993 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 EIF1ADQ8N9N8 165 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 TMEM120AQ9BXJ8 343 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 ARMCX1Q9P291 453 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 WARS2Q9UGM6 360 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SPDYE16A6NNV3 312 aaPredicted RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SHOX2O60902 331 aaPredicted RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 HNRNPCP07910 306 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 RRP1BQ14684 758 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SWT1Q5T5J6 900 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 ARMCX2Q7L311 632 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 IGSF9BQ9UPX0 1349 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 ARHGAP10A1A4S6 786 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 ACADSP16219 412 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SOX11P35716 441 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 OLFML2BQ68BL8 750 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 MIEF2Q96C03 454 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 C10orf88Q9H8K7 445 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 FAM49BQ9NUQ9 324 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 PYGBP11216 843 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 BMPR2Q13873 1038 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 SNX30Q5VWJ9 437 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 DAB2IPQ5VWQ8 1189 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 KLC3Q6P597 504 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 RMDN2Q96LZ7 410 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 PAPOLBQ9NRJ5 636 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-205ENST00000397041 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 AQP5P55064 265 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 RASA2Q15283 850 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 TKFCQ3LXA3 575 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 TTC39BQ5VTQ0 682 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 DUPD1Q68J44 220 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 TCP10LQ8TDR4 215 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 CLEC16AQ2KHT3 1053 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 MCOLN2Q8IZK6 566 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 LRRC71Q8N4P6 559 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 ACAD9Q9H845 621 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 ATP9AO75110 1047 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 SUPT3HO75486 399 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 EEF1DP29692 281 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 OTOP1Q7RTM1 612 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 EXOC3L1Q86VI1 746 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 CCDC117Q8IWD4 279 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 KIF12Q96FN5 646 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 FAM167AQ96KS9 214 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 NIF3L1Q9GZT8 377 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 ERVK-5Q9HDB9 667 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 PAK5Q9P286 719 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 SNX9Q9Y5X1 595 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 MYO5BQ9ULV0 1848 aa16.53■□□□□ 0.24
ATP2A3-205ENST00000397041 ADRA1DP25100 572 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 PHKA2P46019 1235 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 FOXD4Q12950 439 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 ARL13BQ3SXY8 428 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 LRRC8EQ6NSJ5 796 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 KCTD17Q8N5Z5 321 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 SKA2Q8WVK7 121 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 RSAD1Q9HA92 442 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 DNPEPQ9ULA0 475 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 AURKCQ9UQB9 309 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 MAGEA13PA6NCF6 341 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 EFTUD2Q15029 972 aaKnown RBP eCLIP16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 EME1Q96AY2 570 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 HES6Q96HZ4 224 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 SIK2Q9H0K1 926 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 FBXO40Q9UH90 709 aa16.52■□□□□ 0.24
ATP2A3-205ENST00000397041 NOL4O94818 638 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 PMLP29590 882 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 IZUMO2Q6UXV1 221 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 EXD1Q8NHP7 514 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 HIC2Q96JB3 615 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 SLCO1B3Q9NPD5 702 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 KRT82Q9NSB4 513 aa16.52■□□□□ 0.23
ATP2A3-205ENST00000397041 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms