RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 TBX20Q9UMR3 447 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 CENPCQ03188 943 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 LRRC23Q53EV4 343 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 FAM81AQ8TBF8 368 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 OSBPL8Q9BZF1 889 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 EHMT1Q9H9B1 1298 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 TMEM8AQ9HCN3 771 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 DMAP1Q9NPF5 467 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 NRXN2Q9P2S2 1712 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 DHX15O43143 795 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 LGR5O75473 907 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 IFNB1P01574 187 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 CETN2P41208 172 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 NPTX2P47972 431 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 NOP14P78316 857 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 RASIP1Q5U651 963 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 SLC39A4Q6P5W5 647 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 KLF6Q99612 283 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 MAK16Q9BXY0 300 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 DNPEPQ9ULA0 475 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 ASTN2O75129 1339 aaPredicted RBP25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 GOLGA8RI6L899 631 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 HNRNPDLO14979 420 aaKnown RBP25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 ZCCHC18P0CG32 403 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 EFTUD2Q15029 972 aaKnown RBP eCLIP25.26■■□□□ 1.634e-7■■■□□ 15.6
CSNK1E-203ENST00000396832 RINLQ6ZS11 566 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 FAM210AQ96ND0 272 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 TUBB6Q9BUF5 446 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 UBE2OQ9C0C9 1292 aaKnown RBP25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 ZNF148Q9UQR1 794 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 LRRC37AA6NMS7 1700 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 UBR3Q6ZT12 1888 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 DSG3P32926 999 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 PIK3CAP42336 1068 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 WNT7BP56706 349 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 MTMR1Q13613 665 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 WDR72Q3MJ13 1102 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 SESTD1Q86VW0 696 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 ZNF212Q9UDV6 495 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 WASF2Q9Y6W5 498 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 ATRNL1Q5VV63 1379 aa25.26■■□□□ 1.63
CSNK1E-203ENST00000396832 LY75O60449 1722 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 UNGP13051 313 aaPredicted RBP25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 KRT4P19013 534 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 GAD2Q05329 585 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 CCNG2Q16589 344 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 ZBED8Q8IZ13 594 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 RANBP17Q9H2T7 1088 aaKnown RBP25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 TELO2Q9Y4R8 837 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 THOC5Q13769 683 aaKnown RBP25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 MYBPC2Q14324 1141 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 PRR11Q96HE9 360 aaPredicted RBP25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 TAS2R1Q9NYW7 299 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 KAT6AQ92794 2004 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 MYPNQ86TC9 1320 aa25.25■■□□□ 1.63
CSNK1E-203ENST00000396832 ADRA1DP25100 572 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 KLRC2P26717 231 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 GPC3P51654 580 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 MRPS9P82933 396 aaKnown RBP25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 TKFCQ3LXA3 575 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 SCARA3Q6AZY7 606 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 RFX8Q6ZV50 586 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 KCTD17Q8N5Z5 321 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 TMEM161BQ8NDZ6 487 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 RIT2Q99578 217 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 C1orf112Q9NSG2 853 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 UMODL1Q5DID0 1318 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 LYNP07948 512 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 NEK3P51956 506 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 GPS1Q13098 491 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 KLF1Q13351 362 aaPredicted RBP25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 CEP128Q6ZU80 1094 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 PDCD7Q8N8D1 485 aaKnown RBP25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 TTC25Q96NG3 672 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 KMT5AQ9NQR1 393 aa25.24■■□□□ 1.63
CSNK1E-203ENST00000396832 TESPA1A2RU30 521 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 GSTA3Q16772 222 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 CNPY1Q3B7I2 92 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 AZIN2Q96A70 460 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 FOXP3Q9BZS1 431 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 SAE1Q9UBE0 346 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 TMX2Q9Y320 296 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 KLRG2A4D1S0 409 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 NPR1P16066 1061 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 ERFP50548 548 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 ARSEP51690 589 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 RPL7AP62424 266 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 ZBTB16Q05516 673 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 DMP1Q13316 513 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 SEPT7Q16181 437 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 STRIP1Q5VSL9 837 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 NR1H4Q96RI1 486 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 FBXO6Q9NRD1 293 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
CSNK1E-203ENST00000396832 TNNI1P19237 187 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 SERPINB3P29508 390 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 PLCB3Q01970 1234 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 MCL1Q07820 350 aa25.22■■□□□ 1.63
CSNK1E-203ENST00000396832 ZC3H12AQ5D1E8 599 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms