RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 KIF9Q9HAQ2 790 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 KMT5AQ9NQR1 393 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-202ENST00000396629 TCHHQ07283 1943 aa9.17□□□□□ -0.94
SCFD1-202ENST00000396629 NBEAQ8NFP9 2946 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 TTC26A0AVF1 554 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 HYAL3O43820 417 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 TOM1L1O75674 476 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 HARSP12081 509 aaKnown RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 DDX6P26196 483 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 GJA4P35212 333 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 DGKEP52429 567 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 MAPK7Q13164 816 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 DMP1Q13316 513 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 NOLC1Q14978 699 aaKnown RBP eCLIP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 VEPH1Q14D04 833 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 PDGFRLQ15198 375 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 SEZ6Q53EL9 994 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 USP39Q53GS9 565 aaKnown RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 HAUS3Q68CZ6 603 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 ARMCX5Q6P1M9 558 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 CENPQQ7L2Z9 268 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 TMEM150AQ86TG1 271 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 NTPCRQ9BSD7 190 aaKnown RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 CCL26Q9Y258 94 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 DMXL2Q8TDJ6 3036 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 CEP192Q8TEP8 1941 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 ANAPC1Q9H1A4 1944 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 PI4KAP42356 2102 aa9.16□□□□□ -0.94
SCFD1-202ENST00000396629 ANKRD11Q6UB99 2663 aaPredicted RBP9.16□□□□□ -0.94
SCFD1-202ENST00000396629 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 HIP1RO75146 1068 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 F11P03951 625 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 OR52Z1P0C646 297 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 CXCL8P10145 99 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 PAX3P23760 479 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 GBP1P32455 592 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SPAG1Q07617 926 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 MCL1Q07820 350 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ZNF268Q14587 947 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 UAP1L1Q3KQV9 507 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 NAIF1Q69YI7 327 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 KIAA1211LQ6NV74 962 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 PIP4P1Q86T03 277 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 RASSF3Q86WH2 238 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 CD101Q93033 1021 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 KIF12Q96FN5 646 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 HAPLN2Q9GZV7 340 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 C17orf75Q9HAS0 396 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 TDP1Q9NUW8 608 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 KLK13Q9UKR3 277 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ADAMTS9Q9P2N4 1935 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SCN1AP35498 2009 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 DSPP15924 2871 aaKnown RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SLC16A4O15374 487 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 CYP11A1P05108 521 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ADRB2P07550 413 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 CLTAP09496 248 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ODC1P11926 461 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 BCKDHBP21953 392 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 U2AF2P26368 475 aaKnown RBP eCLIP9.15□□□□□ -0.942e-8■■■■□ 20.1
SCFD1-202ENST00000396629 AVPR1AP37288 418 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 NLRP12P59046 1061 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 LILRA4P59901 499 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 LMAN2Q12907 356 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 OR10T2Q8NGX3 314 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 GIPC2Q8TF65 315 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SENP8Q96LD8 212 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 DRC1Q96MC2 740 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 TSPAN18Q96SJ8 248 aa9.15□□□□□ -0.94
SCFD1-202ENST00000396629 SEPT5Q99719 369 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 DDX19AQ9NUU7 478 aaKnown RBP9.15□□□□□ -0.94
SCFD1-202ENST00000396629 LACTBL1A8MY62 500 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 PPEF2O14830 753 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 XPOTO43592 962 aaKnown RBP9.14□□□□□ -0.95
SCFD1-202ENST00000396629 HAPLN1P10915 354 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-202ENST00000396629 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
SCFD1-202ENST00000396629 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCFD1-202ENST00000396629 GUCY2FP51841 1108 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 SMARCB1Q12824 385 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 BFSP1Q12934 665 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 SLC39A12Q504Y0 691 aa9.14□□□□□ -0.95
SCFD1-202ENST00000396629 SOWAHCQ53LP3 525 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-202ENST00000396629 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms