RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 DCLK1O15075 740 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 FRS3O43559 492 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 HRGP04196 525 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 EN2P19622 333 aaPredicted RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 GATA3P23771 443 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 PEX2P28328 305 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 GCLCP48506 637 aaPredicted RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 SLC11A2P49281 568 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 NDUFV1P49821 464 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 ZNF134P52741 427 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 UCP3P55916 312 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 FAM193AP78312 1265 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 SF3B3Q15393 1217 aaKnown RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 HECTD2Q5U5R9 776 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 SP5Q6BEB4 398 aaPredicted RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 DARS2Q6PI48 645 aaKnown RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 MICALCLQ6ZW33 695 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 ULK2Q8IYT8 1036 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 FAM9AQ8IZU1 332 aaPredicted RBP5.18□□□□□ -1.58
CMC1-202ENST00000396610 LPIN2Q92539 896 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 MAML1Q92585 1016 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 ANKS1AQ92625 1134 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 TTPALQ9BTX7 342 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 SPATA5L1Q9BVQ7 753 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 DPH1Q9BZG8 443 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 CYP4F11Q9HBI6 524 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 CASS4Q9NQ75 786 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 INTS13Q9NVM9 706 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 SYBUQ9NX95 663 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 STK32BQ9NY57 414 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 RAD54BQ9Y620 910 aa5.18□□□□□ -1.58
CMC1-202ENST00000396610 GOLIM4O00461 696 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 BRAFP15056 766 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 PPP3CBP16298 524 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 ITGALP20701 1170 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 FSTL1Q12841 308 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
CMC1-202ENST00000396610 POLD3Q15054 466 aaPredicted RBP5.17□□□□□ -1.58
CMC1-202ENST00000396610 OR6B3Q8NGW1 331 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 SLC30A5Q8TAD4 765 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 LINC00476Q8WZB0 136 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 HEPHQ9BQS7 1158 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 AIFM2Q9BRQ8 373 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 KCTD5Q9NXV2 234 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 XPR1Q9UBH6 696 aa5.17□□□□□ -1.58
CMC1-202ENST00000396610 A0A087WWL8 130 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 A0A0B4J269 797 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 BTN3A1O00481 513 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 KIF3BO15066 747 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 HMGB1P09429 215 aaKnown RBP5.16□□□□□ -1.58
CMC1-202ENST00000396610 HKR1P10072 659 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TGM1P22735 817 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 GNALP38405 381 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 AVPR1BP47901 424 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 LILRA4P59901 499 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 SLC13A2Q13183 592 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TUBB3Q13509 450 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 SEMA5AQ13591 1074 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 RBM20Q5T481 1227 aaKnown RBP5.16□□□□□ -1.58
CMC1-202ENST00000396610 LMBRD2Q68DH5 695 aaPredicted RBP5.16□□□□□ -1.58
CMC1-202ENST00000396610 LAIR1Q6GTX8 287 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TMEM108Q6UXF1 575 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 MRGPRGQ86SM5 289 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 LNX2Q8N448 690 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 DNAJC5GQ8N7S2 189 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 SUPT20HQ8NEM7 779 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 SORCS2Q96PQ0 1159 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 PRRX2Q99811 253 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 SMURF2Q9HAU4 748 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 DDX21Q9NR30 783 aaKnown RBP eCLIP5.16□□□□□ -1.58
CMC1-202ENST00000396610 CPNE7Q9UBL6 633 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TPCN1Q9ULQ1 816 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 FAM50BQ9Y247 325 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TMX2Q9Y320 296 aa5.16□□□□□ -1.58
CMC1-202ENST00000396610 TMEM191CA6NGB0 347 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 F5H697 171 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 FOXN1O15353 648 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 MGEA5O60502 916 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 ATXN1LP0C7T5 689 aaKnown RBP5.15□□□□□ -1.59
CMC1-202ENST00000396610 SRGNP10124 158 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 CD6P30203 668 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 VIPR2P41587 438 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 SEC24CP53992 1094 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 SUMO3P55854 103 aaPredicted RBP5.15□□□□□ -1.59
CMC1-202ENST00000396610 FOXI1Q12951 378 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 CTBP1Q13363 440 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 VPS53Q5VIR6 699 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 PCSK4Q6UW60 755 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 Q6ZNX1 250 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 TSHZ1Q6ZSZ6 1077 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 MPP5Q8N3R9 675 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 SLC15A4Q8N697 577 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 B3GALNT2Q8NCR0 500 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 CAVIN3Q969G5 261 aa5.15□□□□□ -1.59
CMC1-202ENST00000396610 CCDC136Q96JN2 1154 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms