RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TFB1MQ8WVM0 346 aaKnown RBP16.33■□□□□ 0.2
GNE-202ENST00000396594 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.2
GNE-202ENST00000396594 AGO4Q9HCK5 861 aaKnown RBP16.33■□□□□ 0.2
GNE-202ENST00000396594 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 TLR2O60603 784 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 SOAT2O75908 522 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 SESN3P58005 492 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 STK4Q13043 487 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 NCAPHQ15003 741 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 MRNIPQ6NTE8 343 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 HIBCHQ6NVY1 386 aaPredicted RBP16.33■□□□□ 0.2
GNE-202ENST00000396594 UNC45BQ8IWX7 931 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 TMCO5AQ8N6Q1 288 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 TMEM169Q96HH4 297 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 RBBP8Q99708 897 aa16.33■□□□□ 0.2
GNE-202ENST00000396594 C16orf96A6NNT2 1141 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ANGPT2O15123 496 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 VCLP18206 1134 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 SLC12A1Q13621 1099 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 LRRC8BQ6P9F7 803 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 C1orf131Q8NDD1 294 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 CXorf38Q8TB03 319 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 PDCD6IPQ8WUM4 868 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 ZNF512Q96ME7 567 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 TAAR1Q96RJ0 339 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 RBM15Q96T37 977 aaKnown RBP eCLIP16.32■□□□□ 0.2
GNE-202ENST00000396594 SEZ6LQ9BYH1 1024 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.32■□□□□ 0.2
GNE-202ENST00000396594 BLOC1S6Q9UL45 172 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 NEU2Q9Y3R4 380 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 FAM47DPA6NHR8 397 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 SNAP23O00161 211 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 PLA2G6O60733 806 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ZMYND10O75800 440 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 TGM2P21980 687 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 GGCXP38435 758 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 GNASQ5JWF2 1037 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 STAMBPL1Q96FJ0 436 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 CEP19Q96LK0 163 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 RAD18Q9NS91 495 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 UXTQ9UBK9 157 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 MOCS2O96007 188 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 MYL2P10916 166 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 FBXO44Q9H4M3 255 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 MAP3K13O43283 966 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ATP1A1P05023 1023 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 PAEPP09466 180 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 HSPA13P48723 471 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 GRB10Q13322 594 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 DCLK2Q8N568 766 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 CCNYL1Q8N7R7 359 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 MRPS31Q92665 395 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 MCEEQ96PE7 176 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ERP44Q9BS26 406 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 NEUROG2Q9H2A3 272 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 ZW10O43264 779 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 GFAPP14136 432 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 CYP2C18P33260 490 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 POLD3Q15054 466 aaPredicted RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 TRIML2Q8N7C3 387 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 TEKT4Q8WW24 435 aa16.32■□□□□ 0.2
GNE-202ENST00000396594 XPO7Q9UIA9 1087 aaKnown RBP16.32■□□□□ 0.2
GNE-202ENST00000396594 UBA6A0AVT1 1052 aaPredicted RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 VIL1P09327 827 aaKnown RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 SIK2Q9H0K1 926 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 AIPL1Q9NZN9 384 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 KANSL1LA0AUZ9 987 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 GCKP35557 465 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 STX3Q13277 289 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 LBRQ14739 615 aaKnown RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 C1orf146Q5VVC0 180 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 SIKE1Q9BRV8 207 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ABCF3Q9NUQ8 709 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 FHOD1Q9Y613 1164 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 UMODL1Q5DID0 1318 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.31■□□□□ 0.2
GNE-202ENST00000396594 CFLARO15519 480 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 CHGBP05060 677 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 KCNA2P16389 499 aa16.31■□□□□ 0.2
GNE-202ENST00000396594 ACOT2P49753 483 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms