RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NT5DC4Q86YG4 428 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 DCP1BQ8IZD4 617 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 MYCT1Q8N699 235 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 CCDC26Q8TAB7 109 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 FAM83CQ9BQN1 747 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 GKN1Q9NS71 199 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 ANGPTL2Q9UKU9 493 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 CYB561D2O14569 222 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 EPN2O95208 641 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 PRAMEF12O95522 483 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 DRD1P21728 446 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 UBA7P41226 1012 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 RAP1GAPP47736 663 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 TAF6P49848 677 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 TNK2Q07912 1038 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 BFSP1Q12934 665 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 RUNX3Q13761 415 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 CC2D1AQ6P1N0 951 aaPredicted RBP18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 OR10T2Q8NGX3 314 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 FAM212AQ96EL1 285 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 ZC3H10Q96K80 434 aaKnown RBP18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 REEP2Q9BRK0 252 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 SLC46A2Q9BY10 475 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 IL21Q9HBE4 155 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
EXOSC3-202ENST00000396521 K7ENM7 598 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 GDF9O60383 454 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 BMP15O95972 392 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 HAPLN1P10915 354 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 ATF6P18850 670 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 GUCY2FP51841 1108 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 SHC2P98077 582 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 GTF2BQ00403 316 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 ZNF268Q14587 947 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 PDGFRLQ15198 375 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 NFE2Q16621 373 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 GPIHBP1Q8IV16 184 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 TTC9BQ8N6N2 239 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 TTC8Q8TAM2 541 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 MRPS31Q92665 395 aaKnown RBP18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 PLIN2Q99541 437 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 ARRDC1-AS1Q9H2J1 176 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 TDP1Q9NUW8 608 aa18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 UXTQ9UBK9 157 aaPredicted RBP18.91■□□□□ 0.62
EXOSC3-202ENST00000396521 MAP1BP46821 2468 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 PPEF2O14830 753 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 TM4SF5O14894 197 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 AXIN1O15169 862 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 EXTL3O43909 919 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 SOAT2O75908 522 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 KRT18P05783 430 aaKnown RBP18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 CSH1P0DML2 217 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 CSH2P0DML3 217 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 CCDC192P0DO97 292 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 PNPLA4P41247 253 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 CYP4F8P98187 520 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 TSPY1Q01534 308 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 POSTNQ15063 836 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 SV2CQ496J9 727 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 LPIN3Q9BQK8 851 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 ST6GALNAC4Q9H4F1 302 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 VPS45Q9NRW7 570 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 DPP3Q9NY33 737 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 PCDHB5Q9Y5E4 795 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 STYXL1Q9Y6J8 313 aa18.9■□□□□ 0.62
EXOSC3-202ENST00000396521 NPHP3-ACAD11A0A0J9YXS1 232 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 TBCAO75347 108 aaKnown RBP18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 NFICP08651 508 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 NLRP12P59046 1061 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 KARSQ15046 597 aaKnown RBP18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 ADALQ6DHV7 355 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 C11orf74Q86VG3 221 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 MON1AQ86VX9 555 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 ZNF560Q96MR9 790 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 PYM1Q9BRP8 204 aaKnown RBP18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 ABCB6Q9NP58 842 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 C2orf42Q9NWW7 574 aa18.89■□□□□ 0.61
EXOSC3-202ENST00000396521 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 H3BQV1 296 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 IL18RAPO95256 599 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 F11P03951 625 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 PMLP29590 882 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 RPL10AP62906 217 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 ELF2Q15723 593 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 PLA2G2CQ5R387 149 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 STPG1Q5TH74 334 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 FSTL4Q6MZW2 842 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 MAB21L3Q8N8X9 362 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 SPATA18Q8TC71 538 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 GIPC2Q8TF65 315 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 LEO1Q8WVC0 666 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 USP13Q92995 863 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 HVCN1Q96D96 273 aa18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 PDCD11Q14690 1871 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-202ENST00000396521 RHOBTB1O94844 696 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms