RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 KLRC2P26717 231 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 POLR2BP30876 1174 aaKnown RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 RAD23BP54727 409 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 CDR2LQ86X02 465 aaPredicted RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 RELL1Q8IUW5 271 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 ANAPC5Q9UJX4 755 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 IVNS1ABPQ9Y6Y0 642 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 A0A087WZ62 844 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 F8VP50 259 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 TJP3O95049 919 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 KRT1P04264 644 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 TCF4P15884 667 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 TMOD1P28289 359 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 ADORA2AP29274 412 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 CHKAP35790 457 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 ADCY8P40145 1251 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 SEC24CP53992 1094 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 SPOCD1Q6ZMY3 1216 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 POLNQ7Z5Q5 900 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 FNIP1Q8TF40 1166 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 FDXACB1Q9BRP7 624 aaPredicted RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 FOXP3Q9BZS1 431 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 FAM124BQ9H5Z6 455 aaPredicted RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 CYP3A43Q9HB55 503 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 NXF1Q9UBU9 619 aaKnown RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 SIGLEC16A6NMB1 481 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 E7EVH7 732 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 RASGRF2O14827 1237 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 LIASO43766 372 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 GJC1P36383 396 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 IGBP1P78318 339 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 AUHQ13825 339 aaKnown RBP17.74■□□□□ 0.43
NUP50-202ENST00000396096 PTPN20Q4JDL3 420 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 ATP13A4Q4VNC1 1196 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 JADE1Q6IE81 842 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 MFSD7Q6UXD7 560 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 CCDC25Q86WR0 208 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 C16orf70Q9BSU1 422 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 SDCBP2Q9H190 292 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 WDR35Q9P2L0 1181 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 DRG1Q9Y295 367 aaKnown RBP17.74■□□□□ 0.43
NUP50-202ENST00000396096 FAM169AQ9Y6X4 670 aa17.74■□□□□ 0.43
NUP50-202ENST00000396096 hCG_1818297A0A087WSY0 165 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 STRNO43815 780 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 TCEA3O75764 348 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 TTC4O95801 387 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 KRT19P08727 400 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 TRIP13Q15645 432 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 SKIDA1Q1XH10 827 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 WDR72Q3MJ13 1102 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 GJC2Q5T442 439 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 CEP128Q6ZU80 1094 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 SLC4A11Q8NBS3 891 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 EPS8L3Q8TE67 593 aaKnown RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 RAPGEF5Q92565 580 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 PPANQ9NQ55 473 aaKnown RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 MORF4L1Q9UBU8 362 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 CYTH4Q9UIA0 394 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 EFR3BQ9Y2G0 817 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 TLDC2A0PJX2 215 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 C5orf60A6NFR6 353 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 PI4K2BG5E9Z4 385 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 CILPO75339 1184 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 STAU1O95793 577 aaKnown RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 CD19P15391 556 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 RAP1GAPP47736 663 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 SLC10A6Q3KNW5 377 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 ERMARDQ5T6L9 678 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 CYP4A22Q5TCH4 519 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 HIBCHQ6NVY1 386 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 MTHFD1LQ6UB35 978 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 SERPINB12Q96P63 405 aa17.73■□□□□ 0.43
NUP50-202ENST00000396096 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.73■□□□□ 0.43
NUP50-202ENST00000396096 ITGB3P05106 788 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 CETPP11597 493 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 ARF4P18085 180 aaPredicted RBP17.72■□□□□ 0.43
NUP50-202ENST00000396096 CDKN2BP42772 138 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 IFI35P80217 286 aaPredicted RBP17.72■□□□□ 0.43
NUP50-202ENST00000396096 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
NUP50-202ENST00000396096 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
NUP50-202ENST00000396096 TFDP3Q5H9I0 405 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 IZUMO3Q5VZ72 239 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 MICALCLQ6ZW33 695 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 NT5DC4Q86YG4 428 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 XPO6Q96QU8 1125 aaKnown RBP17.72■□□□□ 0.43
NUP50-202ENST00000396096 SYT17Q9BSW7 474 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 SMYD3Q9H7B4 428 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 KLHL11Q9NVR0 708 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 AKT3Q9Y243 479 aa17.72■□□□□ 0.43
NUP50-202ENST00000396096 PDHXO00330 501 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 KRT3P12035 628 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms