RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 C7P10643 843 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MAGEA1P43355 309 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MXI1P50539 228 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PEX5P50542 639 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PEX3P56589 373 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 YWHAEP62258 255 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 FMO1Q01740 532 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PLS1Q14651 629 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ZYXQ15942 572 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 CMPK2Q5EBM0 449 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CCSAPQ6IQ19 270 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 NSMFQ6X4W1 530 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 H2AFVQ71UI9 128 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SV2AQ7L0J3 742 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MON1BQ7L1V2 547 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ARMCX6Q7L4S7 300 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TRIM74Q86UV6 250 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TRIM73Q86UV7 250 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 JAZF1Q86VZ6 243 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CPXCR1Q8N123 301 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CCDC197Q8NCU1 140 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 IFT81Q8WYA0 676 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SEMA4DQ92854 862 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TLCD1Q96CP7 247 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CNOT10Q9H9A5 744 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 PCYOX1Q9UHG3 505 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ITGA11Q9UKX5 1188 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ASB3Q9Y575 518 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MRPL42Q9Y6G3 142 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 NCK2O43639 380 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 EXOC3O60645 756 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 DIAPH2O60879 1101 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 COQ9O75208 318 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CLTAP09496 248 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 NQO1P15559 274 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 PRMT2P55345 433 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 COPS2P61201 443 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 STRN3Q13033 797 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 STILQ15468 1287 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 TRADDQ15628 312 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 SDE2Q6IQ49 451 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 ALKBH5Q6P6C2 394 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 CYFIP1Q7L576 1253 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CACNA2D4Q7Z3S7 1137 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CPLX4Q7Z7G2 160 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 NELFCDQ8IXH7 590 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 GALNT15Q8N3T1 639 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 LRRC52Q8N7C0 313 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 OTUD5Q96G74 571 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 MS4A14Q96JA4 679 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 TINF2Q9BSI4 451 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 BEGAINQ9BUH8 593 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 KATNAL1Q9BW62 490 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 PAPOLBQ9NRJ5 636 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 AGO2Q9UKV8 859 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 PCDHA3Q9Y5H8 950 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 SLC16A4O15374 487 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 HOXA2O43364 376 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 EDN1P05305 212 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 PLEKP08567 350 aaPredicted RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 MYCLP12524 364 aaPredicted RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 ADORA2AP29274 412 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 POLGP54098 1239 aaPredicted RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 SREBF2Q12772 1141 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CUL1Q13616 776 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 SGSM1Q2NKQ1 1148 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 GALNTL6Q49A17 601 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 PKDCCQ504Y2 493 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 TDRD10Q5VZ19 366 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 PLA2G4FQ68DD2 849 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 BEND5Q7L4P6 421 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 POLNQ7Z5Q5 900 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 RPUSD2Q8IZ73 545 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 ANKS4BQ8N8V4 417 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 KLHDC9Q8NEP7 349 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 LRRC45Q96CN5 670 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 NT5C1BQ96P26 610 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 TMEM109Q9BVC6 243 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CCDC134Q9H6E4 229 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 MMRN2Q9H8L6 949 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 CHST12Q9NRB3 414 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 FAM207AQ9NSI2 230 aaPredicted RBP5.68□□□□□ -1.5
VPS41-203ENST00000395969 GDAP2Q9NXN4 497 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 AGAP1Q9UPQ3 857 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 NEU2Q9Y3R4 380 aa5.68□□□□□ -1.5
VPS41-203ENST00000395969 NDC80O14777 642 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 HGSO14964 777 aaPredicted RBP5.67□□□□□ -1.5
VPS41-203ENST00000395969 RAD51CO43502 376 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PSTPIP1O43586 416 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 WFS1O76024 890 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 TOMM70O94826 608 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 NPTXRO95502 500 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 SETSIPP0DME0 302 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 RARAP10276 462 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 CYP11B1P15538 503 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 KLRC1P26715 233 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 PHKA2P46019 1235 aa5.67□□□□□ -1.5
VPS41-203ENST00000395969 DLG4P78352 724 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms