RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 PDZD4Q76G19 769 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-203ENST00000395453 NT5DC4Q86YG4 428 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 HS6ST3Q8IZP7 471 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 LEMD2Q8NC56 503 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 DNASE1L2Q92874 299 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 LRRC3Q9BY71 257 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 FGFBP2Q9BYJ0 223 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 SEMA4GQ9NTN9 838 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 PANK4Q9NVE7 773 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 TFIP11Q9UBB9 837 aaKnown RBP14.63□□□□□ -0.07
SCAF11-203ENST00000395453 HSFX1Q9UBD0 423 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 ANGPTL2Q9UKU9 493 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 EXOC7Q9UPT5 735 aa14.63□□□□□ -0.07
SCAF11-203ENST00000395453 GCNT3O95395 438 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 PDIA4P13667 645 aaKnown RBP14.62□□□□□ -0.07
SCAF11-203ENST00000395453 GARTP22102 1010 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 CCR3P51677 355 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 DUSP4Q13115 394 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 STK38Q15208 465 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 E2F4Q16254 413 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 CSRP2Q16527 193 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 FAM78AQ5JUQ0 283 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 PRR23CQ6ZRP0 262 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 ZSWIM2Q8NEG5 633 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 ZSWIM3Q96MP5 696 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 ZNF396Q96N95 335 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-203ENST00000395453 ASB16Q96NS5 453 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 DNAJC25Q9H1X3 360 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 TRPV4Q9HBA0 871 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 KBTBD4Q9NVX7 518 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 NDRG2Q9UN36 371 aaKnown RBP14.62□□□□□ -0.07
SCAF11-203ENST00000395453 YIPF1Q9Y548 306 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 TSC2P49815 1807 aa14.62□□□□□ -0.07
SCAF11-203ENST00000395453 MTMR11A4FU01 709 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 SHISA7A6NL88 538 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 YEATS4O95619 227 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 LDHAP00338 332 aaKnown RBP14.61□□□□□ -0.07
SCAF11-203ENST00000395453 IDEP14735 1019 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 TAF6P49848 677 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 WNT7BP56706 349 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 PLD1Q13393 1074 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 SIM2Q14190 667 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-203ENST00000395453 ARMCX5Q6P1M9 558 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 TMC8Q8IU68 726 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 PDILTQ8N807 584 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 ATAD1Q8NBU5 361 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 OR10T2Q8NGX3 314 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 PGLYRP2Q96PD5 576 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 TMEM209Q96SK2 561 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 FAM213AQ9BRX8 229 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 TNMDQ9H2S6 317 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 ZFP14Q9HCL3 533 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 ASAH2Q9NR71 780 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 DSEQ9UL01 958 aa14.61□□□□□ -0.07
SCAF11-203ENST00000395453 CYB561D2O14569 222 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 ALDH1A3P47895 512 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 EPHB3P54753 998 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 BRSK2Q8IWQ3 736 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 CCDC65Q8IXS2 484 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 ZNF687Q8N1G0 1237 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 CXorf38Q8TB03 319 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 SMARCD2Q92925 531 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 GPR88Q9GZN0 384 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 ZCWPW1Q9H0M4 648 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 CUEDC2Q9H467 287 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 BRD9Q9H8M2 597 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 SLC27A5Q9Y2P5 690 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 ASB3Q9Y575 518 aa14.6□□□□□ -0.07
SCAF11-203ENST00000395453 KPNA7A9QM74 516 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 EXTL3O43909 919 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 CUTAO60888 179 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 PRPF6O94906 941 aaKnown RBP14.59□□□□□ -0.07
SCAF11-203ENST00000395453 MYL4P12829 197 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 PMLP29590 882 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 CNR2P34972 360 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 CXCL12P48061 93 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 SHC2P98077 582 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 WSCD1Q658N2 575 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 IL31Q6EBC2 164 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-203ENST00000395453 DNAJB7Q7Z6W7 309 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-203ENST00000395453 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 TTC9BQ8N6N2 239 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 SHKBP1Q8TBC3 707 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 PSMG2Q969U7 264 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 SAAL1Q96ER3 474 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
SCAF11-203ENST00000395453 CBWD1Q9BRT8 395 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 TRIM9Q9C026 710 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 LRRC27Q9C0I9 530 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 TMEM206Q9H813 350 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 LMAN1LQ9HAT1 526 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 TRPV5Q9NQA5 729 aa14.59□□□□□ -0.07
SCAF11-203ENST00000395453 CIZ1Q9ULV3 898 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-203ENST00000395453 TCHHQ07283 1943 aa14.58□□□□□ -0.08
SCAF11-203ENST00000395453 CEP295Q9C0D2 2601 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms