RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 NEDD9Q14511 834 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 EFTUD2Q15029 972 aaKnown RBP eCLIP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SNCBQ16143 134 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 CCNG2Q16589 344 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SYCP2LQ5T4T6 812 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 USP37Q86T82 979 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ANKMY2Q8IV38 441 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 KATNAL2Q8IYT4 538 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 C4orf33Q8N1A6 199 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 FITM2Q8N6M3 262 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 CKAP2Q8WWK9 683 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 COPS5Q92905 334 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 TGS1Q96RS0 853 aaKnown RBP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 MAF1Q9H063 256 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ZNF408Q9H9D4 720 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ZNF148Q9UQR1 794 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 LIASO43766 372 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 IFNB1P01574 187 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 GHRP10912 638 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ARL2P36404 184 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ARSEP51690 589 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 GPS1Q13098 491 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 ITIH4Q14624 930 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 CEP120Q8N960 986 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 MMP19Q99542 508 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SLCO1B3Q9NPD5 702 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 L3MBTL1Q9Y468 752 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 USP15Q9Y4E8 981 aaPredicted RBP14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 STYXL1Q9Y6J8 313 aa14.25□□□□□ -0.13
GTF2F1-201ENST00000394456 SRGAP2CP0DJJ0 459 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 MYBL1P10243 752 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 MKRN3Q13064 507 aaKnown RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 KCTD2Q14681 263 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 WDR72Q3MJ13 1102 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 METTL7BQ6UX53 244 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 PHF13Q86YI8 300 aaPredicted RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 SEPT1Q8WYJ6 367 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 SIP14410 1827 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 ADGRA2Q96PE1 1338 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 A0A1W2PPM1 405 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 TMEM191CA6NGB0 347 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 RASA4BC9J798 803 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 CHUKO15111 745 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 RASA4O43374 803 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 PSTPIP1O43586 416 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 TMEM191BP0C7N4 346 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 MMP8P22894 467 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 NAMPTP43490 491 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 GDF10P55107 478 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 GPAT2Q6NUI2 795 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 ZNF677Q86XU0 584 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 STMN4Q9H169 189 aaPredicted RBP14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 ECT2Q9H8V3 914 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 NRBP2Q9NSY0 501 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 CYTH4Q9UIA0 394 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 POLIQ9UNA4 740 aa14.24□□□□□ -0.13
GTF2F1-201ENST00000394456 H0YCG3 227 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 NOP56O00567 594 aaKnown RBP14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 MGRN1O60291 552 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 CSDE1O75534 798 aaKnown RBP14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 ATP6V1G2O95670 118 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 SLC25A27O95847 323 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 CD48P09326 243 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 FGFR1P11362 822 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 STX2P32856 288 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TAF5Q15542 800 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TARBP2Q15633 366 aaKnown RBP14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 ANKRD22Q5VYY1 191 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 SPATA21Q7Z572 469 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TMEM192Q8IY95 271 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 KIAA0319LQ8IZA0 1049 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 EXD1Q8NHP7 514 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TRAPPC12Q8WVT3 735 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 MAML1Q92585 1016 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TCHPQ9BT92 498 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 ZWILCHQ9H900 591 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 PDGFCQ9NRA1 345 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 CENPFP49454 3210 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 LRRD1A4D1F6 860 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 TAC1P20366 129 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 BPIFB4P59827 614 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 DNAJC3Q13217 504 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 RAB6CQ53S08 254 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 SPOCD1Q6ZMY3 1216 aa14.23□□□□□ -0.13
GTF2F1-201ENST00000394456 ARFGAP1Q8N6T3 406 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms