RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 POMGNT1Q8WZA1 660 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 ZNF560Q96MR9 790 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 GCNAQ96QF7 691 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 SEPT5Q99719 369 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 PYM1Q9BRP8 204 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 OLFML3Q9NRN5 406 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 THG1LQ9NWX6 298 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 EXOC7Q9UPT5 735 aa18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 SRPRBQ9Y5M8 271 aaKnown RBP18.88■□□□□ 0.61
SNRPA1-202ENST00000394082 SLC38A8A6NNN8 435 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 SOAT2O75908 522 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 HAPLN1P10915 354 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 DDX6P26196 483 aaKnown RBP eCLIP18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 SATB1Q01826 763 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 CCINQ13939 588 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 LRRTM3Q86VH5 581 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 SFR1Q86XK3 245 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 EFCAB13Q8IY85 973 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 SPATA18Q8TC71 538 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 FAM200AQ8TCP9 573 aa18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 LEO1Q8WVC0 666 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-202ENST00000394082 TISP43B9A030 160 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 K7ESF4 209 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 LDHAP00338 332 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 RETP07949 1114 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 ALCAMQ13740 583 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 NFE2Q16621 373 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 TXNDC11Q6PKC3 985 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 LONP2Q86WA8 852 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 LPIN3Q9BQK8 851 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 SLC46A2Q9BY10 475 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 MRPL44Q9H9J2 332 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 ABCB6Q9NP58 842 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 GTSE1Q9NYZ3 720 aa18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 FBXO2Q9UK22 296 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 KIF26AQ9ULI4 1882 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-202ENST00000394082 FOXD2O60548 495 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 PRAMEF12O95522 483 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 HMGA1P17096 107 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 GARTP22102 1010 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 TXLNAP40222 546 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 TAF12Q16514 161 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 ITPRIPL2Q3MIP1 535 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 L1TD1Q5T7N2 865 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 RRAGBQ5VZM2 374 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 USP49Q70CQ1 688 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 SV2BQ7L1I2 683 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 DYMQ7RTS9 669 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 BRSK2Q8IWQ3 736 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 CMTM8Q8IZV2 173 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 LRRC52Q8N7C0 313 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 ACCSQ96QU6 501 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 FAM83CQ9BQN1 747 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 ACBD6Q9BR61 282 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 RTKNQ9BST9 563 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 PCDHB5Q9Y5E4 795 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 PCDHB13Q9Y5F0 798 aa18.85■□□□□ 0.61
SNRPA1-202ENST00000394082 FRMD3A2A2Y4 597 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 MYMKA6NI61 221 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 F11P03951 625 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 SOX9P48436 509 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 ATXN1P54253 815 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 NLRP12P59046 1061 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 TSPY1Q01534 308 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 TMEM150AQ86TG1 271 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 TMEM86AQ8N2M4 240 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 ZFYVE19Q96K21 471 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 GDAP2Q9NXN4 497 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 ABI2Q9NYB9 513 aaPredicted RBP18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 CDV3Q9UKY7 258 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 CLIC4Q9Y696 253 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 TCHHQ07283 1943 aa18.84■□□□□ 0.61
SNRPA1-202ENST00000394082 DENND4CQ5VZ89 1909 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CCDC163A0A0D9SF12 145 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CSH1P0DML2 217 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CSH2P0DML3 217 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 AVPR1AP37288 418 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CYP4F8P98187 520 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 SIM2Q14190 667 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 ZNF268Q14587 947 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CCDC73Q6ZRK6 1079 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 CXorf38Q8TB03 319 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 TRMT2BQ96GJ1 504 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 MYRFLQ96LU7 910 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 FAM213AQ9BRX8 229 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 PARD6AQ9NPB6 346 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 RBM12Q9NTZ6 932 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 UXTQ9UBK9 157 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 ITGA11Q9UKX5 1188 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 USP18Q9UMW8 372 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 NCOR2Q9Y618 2525 aa18.83■□□□□ 0.6
SNRPA1-202ENST00000394082 VPS37CA5D8V6 355 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 KIAA0391O15091 583 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-202ENST00000394082 HRO43593 1189 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms