RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 ERICH1Q86X53 443 aa20.87■□□□□ 0.93
RAB5C-202ENST00000393860 ALG3Q92685 438 aa20.87■□□□□ 0.93
RAB5C-202ENST00000393860 PNKPQ96T60 521 aa20.87■□□□□ 0.93
RAB5C-202ENST00000393860 PARD6BQ9BYG5 372 aa20.87■□□□□ 0.93
RAB5C-202ENST00000393860 DPEP3Q9H4B8 488 aa20.87■□□□□ 0.93
RAB5C-202ENST00000393860 RBM12Q9NTZ6 932 aaKnown RBP20.87■□□□□ 0.93
RAB5C-202ENST00000393860 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.87■□□□□ 0.93
RAB5C-202ENST00000393860 O00370 1275 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 FGFR1P11362 822 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 PTPN20Q4JDL3 420 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 VCPIP1Q96JH7 1222 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 RPGRIP1Q96KN7 1286 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 CALR3Q96L12 384 aaKnown RBP20.86■□□□□ 0.93
RAB5C-202ENST00000393860 FAM49BQ9NUQ9 324 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 SV2CQ496J9 727 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 PLEKHA7Q6IQ23 1121 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 AADACL2Q6P093 401 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 MRPL10Q7Z7H8 261 aaKnown RBP20.86■□□□□ 0.93
RAB5C-202ENST00000393860 TSPAN18Q96SJ8 248 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 SELENOOQ9BVL4 669 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 L1RE1Q9UN81 338 aa20.86■□□□□ 0.93
RAB5C-202ENST00000393860 POMCP01189 267 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 CALB1P05937 261 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 THP07101 528 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 PDGFRBP09619 1106 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 GOLGA7BQ2TAP0 167 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 KBTBD7Q8WVZ9 684 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 ZNF518BQ9C0D4 1074 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 LHX5Q9H2C1 402 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 TSPAN16Q9UKR8 245 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 INPP5FQ9Y2H2 1132 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 GIT1Q9Y2X7 761 aa20.85■□□□□ 0.93
RAB5C-202ENST00000393860 CASTOR2A6NHX0 329 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 A8MXQ7 604 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 GOLGA8SH3BPF8 625 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CES2O00748 559 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CCL5P13501 91 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 LMO2P25791 158 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 LRPAP1P30533 357 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PNPLA4P41247 253 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 LILRA4P59901 499 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 RPL7AP62424 266 aaKnown RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PPP1R26Q5T8A7 1209 aaPredicted RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PPP1R2P3Q6NXS1 205 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 DNAJC24Q6P3W2 148 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 USP38Q8NB14 1042 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CPXM1Q96SM3 734 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 HINFPQ9BQA5 517 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 RNF208Q9H0X6 261 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 TSPYL2Q9H2G4 693 aaPredicted RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 RSAD1Q9HA92 442 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PAK6Q9NQU5 681 aaPredicted RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PARVAQ9NVD7 372 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 DNM1LO00429 736 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PIK3R2O00459 728 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 RAB27AP51159 221 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CLCNKBP51801 687 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CDR1P51861 262 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CNGA2Q16280 664 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PDCL2Q8N4E4 241 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 TTC39CQ8N584 583 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 APPL2Q8NEU8 664 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 CD101Q93033 1021 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 MCEEQ96PE7 176 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 PAAF1Q9BRP4 392 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 AP1M1Q9BXS5 423 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 MRPL47Q9HD33 250 aaKnown RBP20.84■□□□□ 0.93
RAB5C-202ENST00000393860 GDAP2Q9NXN4 497 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 RNF14Q9UBS8 474 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 SCINQ9Y6U3 715 aa20.84■□□□□ 0.93
RAB5C-202ENST00000393860 A0A0U1RQF3 1178 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 MYO1FO00160 1098 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 PGRMC1O00264 195 aaKnown RBP20.83■□□□□ 0.93
RAB5C-202ENST00000393860 CAND2O75155 1236 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 ERBB2P04626 1255 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 OSTM1Q86WC4 334 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 UBL4BQ8N7F7 174 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 MSANTD4Q8NCY6 345 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 FEZF2Q8TBJ5 459 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 SNX25Q9H3E2 840 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 SYNCQ9H7C4 482 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 SLC38A7Q9NVC3 462 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 USTQ9Y2C2 406 aa20.83■□□□□ 0.93
RAB5C-202ENST00000393860 MIF4GDA9UHW6 222 aaKnown RBP20.82■□□□□ 0.92
RAB5C-202ENST00000393860 PODXLO00592 558 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 HUS1O60921 280 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 ZNF623O75123 536 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 ADAT2Q7Z6V5 191 aaKnown RBP20.82■□□□□ 0.92
RAB5C-202ENST00000393860 RTN4RL1Q86UN2 441 aaPredicted RBP20.82■□□□□ 0.92
RAB5C-202ENST00000393860 ADGRF2Q8IZF7 708 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 RASGEF1CQ8N431 466 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 MMGT1Q8N4V1 131 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 C3orf58Q8NDZ4 430 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 ACTRT1Q8TDG2 376 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 RNPC3Q96LT9 517 aaKnown RBP20.82■□□□□ 0.92
RAB5C-202ENST00000393860 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.82■□□□□ 0.923e-6■■■■□ 22.3
RAB5C-202ENST00000393860 LRRC1Q9BTT6 524 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
RAB5C-202ENST00000393860 PLEKHA4Q9H4M7 779 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms