RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 AJAP1Q9UKB5 411 aaPredicted RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 R3HCC1Q9Y3T6 440 aaKnown RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 KIF26AQ9ULI4 1882 aaPredicted RBP14.17□□□□□ -0.14
USP44-202ENST00000393091 ATP8B3O60423 1300 aa14.17□□□□□ -0.14
USP44-202ENST00000393091 F8VZ95 297 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 NCK2O43639 380 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 ERVFC1P60507 584 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 DUSP6Q16828 381 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 CFAP221Q4G0U5 840 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 SPOUT1Q5T280 376 aaKnown RBP14.16□□□□□ -0.14
USP44-202ENST00000393091 WSCD1Q658N2 575 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 SCML4Q8N228 414 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PI4K2AQ9BTU6 479 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 CSNK1G1Q9HCP0 422 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PNPLA8Q9NP80 782 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PCDHGC3Q9UN70 934 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 URODP06132 367 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PKDCCQ504Y2 493 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 SLC4A11Q8NBS3 891 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 CMASQ8NFW8 434 aaPredicted RBP14.16□□□□□ -0.14
USP44-202ENST00000393091 NEK11Q8NG66 645 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 DNAJC7Q99615 494 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 EMILIN2Q9BXX0 1053 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 CYLDQ9NQC7 956 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 DNAJC12Q9UKB3 198 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 VNN2O95498 520 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 CDH5P33151 784 aaPredicted RBP14.16□□□□□ -0.14
USP44-202ENST00000393091 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
USP44-202ENST00000393091 MRE11P49959 708 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 PSMD5Q16401 504 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 MYCBPAPQ8TBZ2 947 aa14.16□□□□□ -0.14
USP44-202ENST00000393091 HNRNPABQ99729 332 aaKnown RBP14.16□□□□□ -0.14
USP44-202ENST00000393091 NT5C1B-RDH14C9J2C7 533 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 CLCN4P51793 760 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 BPIFB4P59827 614 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 DCP1BQ8IZD4 617 aaKnown RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 OLIG1Q8TAK6 271 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 TMEM176AQ96HP8 235 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 NT5C1AQ9BXI3 368 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 GRPEL1Q9HAV7 217 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 AFF4Q9UHB7 1163 aaKnown RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 FHOD1Q9Y613 1164 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 HELZP42694 1942 aaKnown RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 EPHB6O15197 1021 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 ZBED6P86452 979 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 SPRED2Q7Z698 418 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 TCEAL8Q8IYN2 117 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 RNF214Q8ND24 703 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 OR10T2Q8NGX3 314 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 ELOVL4Q9GZR5 314 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 UBE2TQ9NPD8 197 aaPredicted RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 AVENQ9NQS1 362 aaPredicted RBP14.15□□□□□ -0.14
USP44-202ENST00000393091 IL37Q9NZH6 218 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 FBXW11Q9UKB1 542 aa14.15□□□□□ -0.14
USP44-202ENST00000393091 GFPT2O94808 682 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 VDRP11473 427 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 PBX3P40426 434 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 ZNF697Q5TEC3 545 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 SPATA17Q96L03 361 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 DDX43Q9NXZ2 648 aaKnown RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 CLASP2O75122 1294 aaKnown RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 GYPCP04921 128 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 SOX5P35711 763 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 NDST1P52848 882 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 DDX1Q92499 740 aaKnown RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 TCF25Q9BQ70 676 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 LHX5Q9H2C1 402 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 SNX25Q9H3E2 840 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 CRTAC1Q9NQ79 661 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 MTCH2Q9Y6C9 303 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 GOLGA6L3A6NEY3 463 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 PTPN1P18031 435 aaKnown RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 KLK7P49862 253 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 NFE2Q16621 373 aaPredicted RBP14.14□□□□□ -0.15
USP44-202ENST00000393091 CTC1Q2NKJ3 1217 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 IRF2BP2Q7Z5L9 587 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 B3GALNT2Q8NCR0 500 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 ZNF461Q8TAF7 563 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 SPPL2BQ8TCT7 592 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 DPP7Q9UHL4 492 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 NENFQ9UMX5 172 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 NCANO14594 1321 aa14.14□□□□□ -0.15
USP44-202ENST00000393091 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 CLCN1P35523 988 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP44-202ENST00000393091 CNGA2Q16280 664 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 LCLAT1Q6UWP7 414 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 EFHBQ8N7U6 833 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 STK32AQ8WU08 396 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 ARID3AQ99856 593 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
USP44-202ENST00000393091 NOCTQ9UK39 431 aaKnown RBP14.13□□□□□ -0.15
USP44-202ENST00000393091 C2orf16Q68DN1 1984 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms