RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ZNF560Q96MR9 790 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 NT5C1AQ9BXI3 368 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.64■■□□□ 1.22
SPHK1-202ENST00000392496 SNX9Q9Y5X1 595 aa22.64■■□□□ 1.22
SPHK1-202ENST00000392496 GPR182O15218 404 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 TNFRSF8P28908 595 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 MAN1A1P33908 653 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 PNPLA4P41247 253 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 TAP1Q03518 808 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 ZNF211Q13398 564 aaPredicted RBP22.63■■□□□ 1.21
SPHK1-202ENST00000392496 PPP2R5EQ16537 467 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.63■■□□□ 1.21
SPHK1-202ENST00000392496 HEXIM2Q96MH2 286 aaKnown RBP22.63■■□□□ 1.21
SPHK1-202ENST00000392496 AP1M1Q9BXS5 423 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 L1RE1Q9UN81 338 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 O00370 1275 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 MICAL2O94851 1124 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 SLC7A5Q01650 507 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 ORC1Q13415 861 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 STILQ15468 1287 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 PKN2Q16513 984 aaKnown RBP22.63■■□□□ 1.21
SPHK1-202ENST00000392496 DNAJC24Q6P3W2 148 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 KLHL7Q8IXQ5 586 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 HACE1Q8IYU2 909 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 ARRDC4Q8NCT1 418 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 SLITRK6Q9H5Y7 841 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 IP6K2Q9UHH9 426 aa22.63■■□□□ 1.21
SPHK1-202ENST00000392496 TMEM191CA6NGB0 347 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 ZMYND10O75800 440 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 GSCP56915 257 aaPredicted RBP22.62■■□□□ 1.21
SPHK1-202ENST00000392496 NFX1Q12986 1120 aaKnown RBP22.62■■□□□ 1.21
SPHK1-202ENST00000392496 PTK7Q13308 1070 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 ITGA7Q13683 1181 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 FBXO47Q5MNV8 452 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
SPHK1-202ENST00000392496 C3orf20Q8ND61 904 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 PLVAPQ9BX97 442 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 FUT8Q9BYC5 575 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 FAM105AQ9NUU6 356 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 FAM53CQ9NYF3 392 aa22.62■■□□□ 1.21
SPHK1-202ENST00000392496 ITGA4P13612 1032 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 THPOP40225 353 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 ACLYP53396 1101 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 PTPN20Q4JDL3 420 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 PPP1R15BQ5SWA1 713 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 UNC93AQ86WB7 457 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 MRPL45Q9BRJ2 306 aaKnown RBP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 GDF3Q9NR23 364 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 GDAP2Q9NXN4 497 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 OGFRQ9NZT2 677 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 WDR35Q9P2L0 1181 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 GOLGA6L10A0A0M3HER8 536 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 MOXD2PA6NHM9 499 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 SART1O43290 800 aaKnown RBP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 RAD51CO43502 376 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 HEXIM1O94992 359 aaKnown RBP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 PYGMP11217 842 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 MRPS25P82663 173 aaKnown RBP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 LCLAT1Q6UWP7 414 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 IFT20Q8IY31 132 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 SLAIN1Q8ND83 568 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 TSEN34Q9BSV6 310 aaKnown RBP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 ERVK-5Q9HDB9 667 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 PRDM10Q9NQV6 1147 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 RNF19AQ9NV58 838 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 CYTH4Q9UIA0 394 aa22.61■■□□□ 1.21
SPHK1-202ENST00000392496 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.61■■□□□ 1.21
SPHK1-202ENST00000392496 PSTPIP1O43586 416 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 LRPAP1P30533 357 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 TAF6P49848 677 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 SOX4Q06945 474 aaPredicted RBP22.6■■□□□ 1.21
SPHK1-202ENST00000392496 FAM26DQ5JW98 314 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 HDXQ7Z353 690 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 C18orf8Q96DM3 657 aa22.6■■□□□ 1.21
SPHK1-202ENST00000392496 PPP1R10Q96QC0 940 aaKnown RBP22.6■■□□□ 1.21
SPHK1-202ENST00000392496 DDX47Q9H0S4 455 aaKnown RBP22.6■■□□□ 1.21
SPHK1-202ENST00000392496 KPNA7A9QM74 516 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 M0QYV0 167 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 PTGESO14684 152 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 MAP2K7O14733 419 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 GLI1P08151 1106 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 GPD2P43304 727 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 RPL7AP62424 266 aaKnown RBP22.59■■□□□ 1.21
SPHK1-202ENST00000392496 SV2CQ496J9 727 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 AADACL2Q6P093 401 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 CCDC26Q8TAB7 109 aa22.59■■□□□ 1.21
SPHK1-202ENST00000392496 AGO3Q9H9G7 860 aaKnown RBP22.59■■□□□ 1.21
SPHK1-202ENST00000392496 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.59■■□□□ 1.21
SPHK1-202ENST00000392496 SASH3O75995 380 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 GJB6O95452 261 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 GABRB2P47870 512 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 ZNF268Q14587 947 aaPredicted RBP22.58■■□□□ 1.21
SPHK1-202ENST00000392496 SOWAHAQ2M3V2 549 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 TRIM71Q2Q1W2 868 aaKnown RBP22.58■■□□□ 1.21
SPHK1-202ENST00000392496 CYP4A22Q5TCH4 519 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 DCUN1D2Q6PH85 259 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 LIMS2Q7Z4I7 341 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 MAATS1Q7Z4T9 603 aa22.58■■□□□ 1.21
SPHK1-202ENST00000392496 SLC13A5Q86YT5 568 aaPredicted RBP22.58■■□□□ 1.21
SPHK1-202ENST00000392496 RHOT1Q8IXI2 618 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms