RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ZRANB2O95218 330 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 LRPAP1P30533 357 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 ORC1Q13415 861 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 SGO2Q562F6 1265 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 C8orf74Q6P047 294 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 PPP1R10Q96QC0 940 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 AGO3Q9H9G7 860 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRMT13Q9NUP7 481 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 GDAP2Q9NXN4 497 aa12.14□□□□□ -0.47
SMARCAL1-203ENST00000392128 O00370 1275 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 PTGESO14684 152 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 MICAL2O94851 1124 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 MAN1A1P33908 653 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 MARCKSL1P49006 195 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 GSCP56915 257 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 TAP1Q03518 808 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 SOX4Q06945 474 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 STILQ15468 1287 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 PHLDB2Q86SQ0 1253 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 HEXIM2Q96MH2 286 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 MRPL45Q9BRJ2 306 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRIM7Q9C029 511 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 SQORQ9Y6N5 450 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 FGGP02679 453 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 ITGA4P13612 1032 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 GRK4P32298 578 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 TAF6P49848 677 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 SV2CQ496J9 727 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 LCLAT1Q6UWP7 414 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 CPNE8Q86YQ8 564 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 C3orf20Q8ND61 904 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 RNF19AQ9NV58 838 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLC38A7Q9NVC3 462 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 CYTH4Q9UIA0 394 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 PADI3Q9ULW8 664 aa12.13□□□□□ -0.47
SMARCAL1-203ENST00000392128 TMEM191CA6NGB0 347 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 KPNA7A9QM74 516 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 KRIT1O00522 736 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 RAB27AP51159 221 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 RWDD2BP57060 319 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 PAK2Q13177 524 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 LPIN1Q14693 890 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 PTPN20Q4JDL3 420 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 MRPL10Q7Z7H8 261 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 KRT12Q99456 494 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 STIM2Q9P246 746 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 IP6K2Q9UHH9 426 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GIT1Q9Y2X7 761 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 M0QYV0 167 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZNF623O75123 536 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GHRP10912 638 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 HSPA6P17066 643 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 CD52P31358 61 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GPD2P43304 727 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 DSC3Q14574 896 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 BEND6Q5SZJ8 279 aaPredicted RBP12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 SEL1L2Q5TEA6 688 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GSTCDQ8NEC7 633 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 HDAC7Q8WUI4 952 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 AP1M1Q9BXS5 423 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 GOLGA2P5Q9HBQ8 144 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 DMGDHQ9UI17 866 aaKnown RBP12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
SMARCAL1-203ENST00000392128 A0A1W2PQ45 241 aaPredicted RBP12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 A0A1W2PQY0 241 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 SPTLC1O15269 473 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 SEC31AO94979 1220 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 MLH1P40692 756 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 GABRB2P47870 512 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 PPP2R5EQ16537 467 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 C18orf8Q96DM3 657 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 CPXM1Q96SM3 734 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 PLVAPQ9BX97 442 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 OSBPL7Q9BZF2 842 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 MEIS3P2A8K0S8 358 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms