RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 TRIM16LQ309B1 348 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 C2CD6Q53TS8 623 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PCNX4Q63HM2 1172 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 CKAP2Q8WWK9 683 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 C10orf88Q9H8K7 445 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 NYAP2Q9P242 653 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 USP21Q9UK80 565 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ATP11BQ9Y2G3 1177 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 M0R3G1 203 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ZBTB39O15060 712 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 AP1G2O75843 785 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 RARAP10276 462 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 THRAP10827 490 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PYGMP11217 842 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 BGNP21810 368 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 MTFR1Q15390 333 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 WLSQ5T9L3 541 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 GPAT2Q6NUI2 795 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ADCK1Q86TW2 530 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 CATSPER2Q96P56 530 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 RIT2Q99578 217 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PRPF18Q99633 342 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 TOPORSQ9NS56 1045 aaPredicted RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 TNS3Q68CZ2 1445 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 KIAA1210Q9ULL0 1709 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ATXN2Q99700 1313 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 PIK3CDO00329 1044 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 AHCYL1O43865 530 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PROSCO94903 275 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ATP4AP20648 1035 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PBX1P40424 430 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PHKA2P46019 1235 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 EFNA5P52803 228 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ABCE1P61221 599 aaKnown RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 PLOD1Q02809 727 aaPredicted RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 SGSM1Q2NKQ1 1148 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 LRRC8BQ6P9F7 803 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 CATSPER4Q7RTX7 472 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 GPR141Q7Z602 305 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ZNF786Q8N393 782 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 EXD1Q8NHP7 514 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ACSF2Q96CM8 615 aaPredicted RBP9.03□□□□□ -0.96
PKP4-202ENST00000389759 RMDN2Q96LZ7 410 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 ASPSCR1Q9BZE9 553 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 NEXMIFQ5QGS0 1516 aa9.03□□□□□ -0.96
PKP4-202ENST00000389759 GLRA3O75311 464 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 SRP72O76094 671 aaKnown RBP9.02□□□□□ -0.96
PKP4-202ENST00000389759 POLBP06746 335 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 FAM200BP0CF97 657 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 GTF2H1P32780 548 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 MCL1Q07820 350 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 NSUN2Q08J23 767 aaKnown RBP eCLIP9.02□□□□□ -0.96
PKP4-202ENST00000389759 STX5Q13190 355 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 SLC26A11Q86WA9 606 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 NUP93Q8N1F7 819 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 USP6NLQ92738 828 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 CNDP1Q96KN2 507 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 INPP4AQ96PE3 977 aaPredicted RBP9.02□□□□□ -0.96
PKP4-202ENST00000389759 ILKAPQ9H0C8 392 aaPredicted RBP9.02□□□□□ -0.96
PKP4-202ENST00000389759 NINJ2Q9NZG7 142 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 SUGT1Q9Y2Z0 365 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 CEP152O94986 1710 aa9.02□□□□□ -0.96
PKP4-202ENST00000389759 E2F8A0AVK6 867 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SHOX2O60902 331 aaPredicted RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 ZNF189O75820 626 aaPredicted RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 NPR1P16066 1061 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 PEX5P50542 639 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 XRCC4Q13426 336 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 OASLQ15646 514 aaKnown RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 TFDP3Q5H9I0 405 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 C4orf22Q6V702 233 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 CORO1CQ9ULV4 474 aaPredicted RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 SOX13Q9UN79 622 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SHOC2Q9UQ13 582 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 DNAJC16Q9Y2G8 782 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 USP32Q8NFA0 1604 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 EPHB6O15197 1021 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 MSH4O15457 936 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 TPST1O60507 370 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 HUS1O60921 280 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SHBGP04278 402 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 HNRNPH3P31942 346 aaKnown RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 NUP107P57740 925 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 AUHQ13825 339 aaKnown RBP9.02□□□□□ -0.97
PKP4-202ENST00000389759 SLC45A4Q5BKX6 768 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 XKR3Q5GH77 459 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 FAXCQ5TGI0 409 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 LAYNQ6UX15 382 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SLC25A41Q8N5S1 370 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 SPATA20Q8TB22 786 aa9.02□□□□□ -0.97
PKP4-202ENST00000389759 TCP10LQ8TDR4 215 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms