RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 RIT2Q99578 217 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAM96AQ9H5X1 160 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 SLC24A2Q9UI40 661 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 SSX2IPQ9Y2D8 614 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 SDC4P31431 198 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 LCA5Q86VQ0 697 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ECHDC2Q86YB7 292 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 EXD1Q8NHP7 514 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 B4GALNT2Q8NHY0 566 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 CXorf38Q8TB03 319 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ACTL9Q8TC94 416 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 MED10Q9BTT4 135 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 DNALI1O14645 258 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 ABCD1P33897 745 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 TTC27Q6P3X3 843 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAM13CQ8NE31 585 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 GABPB2Q8TAK5 448 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 AGBL1Q96MI9 1066 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 MRPL46Q9H2W6 279 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 COG5Q9UP83 839 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 STARD13Q9Y3M8 1113 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 TGFB1I1O43294 461 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 MAPK6Q16659 721 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 DUOXA2Q1HG44 320 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 TTC39BQ5VTQ0 682 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 MFSD7Q6UXD7 560 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 KCNMB3Q9NPA1 279 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 SUGT1Q9Y2Z0 365 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 ANKRD63C9JTQ0 380 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 SUPT3HO75486 399 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 PAEPP09466 180 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 COPAP53621 1224 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 SOX10P56693 466 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 PRAMEP78395 509 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 OCRLQ01968 901 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 TAP1Q03518 808 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 C6orf89Q6UWU4 347 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 LRRC15Q8TF66 581 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 KLHL8Q9P2G9 620 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
TRAPPC9-201ENST00000389328 C5orf60A6NFR6 353 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 E7ENQ6 273 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 APOEP02649 317 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 PDGFRAP16234 1089 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF568Q3ZCX4 644 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 TFDP3Q5H9I0 405 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 PIGWQ7Z7B1 504 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 CCDC97Q96F63 343 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 RNF146Q9NTX7 359 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 USP20Q9Y2K6 914 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 RNF103-CHMP3A0A140T963 221 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ECE2O60344 883 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 LGR5O75473 907 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 KLHL2O95198 593 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 NPR1P16066 1061 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ATP6V1C1P21283 382 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 SPOCD1Q6ZMY3 1216 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 OTOP1Q7RTM1 612 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ETNPPLQ8TBG4 499 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ACER1Q8TDN7 264 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 TMA16Q96EY4 203 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 KCNK16Q96T55 309 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 C21orf2O43822 256 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 SEC24DO94855 1032 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 SHMT1P34896 483 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 GPC3P51654 580 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 CUL2Q13617 745 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF268Q14587 947 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ATP13A4Q4VNC1 1196 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 POU5F2Q8N7G0 328 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ZNF184Q99676 751 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 XAB2Q9HCS7 855 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ETAA1Q9NY74 926 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 POLLQ9UGP5 575 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 XPO1O14980 1071 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 PSMG1O95456 288 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 MCF2P10911 925 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 NPTX2P47972 431 aa13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 GCLCP48506 637 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-201ENST00000389328 ITKQ08881 620 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms