RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 FAM118BQ9BPY3 351 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 EURLQ9NYK6 297 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 DNPEPQ9ULA0 475 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 DNAJC25-GNG10A0A024R161 153 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 CCT8L1PA6NM43 557 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 MED7O43513 233 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 POLR2BP30876 1174 aaKnown RBP15.79■□□□□ 0.12
SCFD2-201ENST00000388940 GSCP56915 257 aaPredicted RBP15.79■□□□□ 0.12
SCFD2-201ENST00000388940 CCDC142Q17RM4 750 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 FBXW10Q5XX13 1052 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 CCDC62Q6P9F0 684 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 PWWP2AQ96N64 755 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 NFKBIZQ9BYH8 718 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 SAMD15Q9P1V8 674 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 TNFSF13BQ9Y275 285 aa15.79■□□□□ 0.12
SCFD2-201ENST00000388940 LOC102724159A0A0B4J2E5 919 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 TMEM120BA0PK00 339 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 SIGLEC16A6NMB1 481 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 DNM1LO00429 736 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 HBP1O60381 514 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 ITGAVP06756 1048 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 HNRNPH1P31943 449 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 NF2P35240 595 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 CDKN2BP42772 138 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 MAGEA4P43358 317 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 PWP2Q15269 919 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 OASLQ15646 514 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 ZNF394Q53GI3 561 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 KAZNQ674X7 775 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 TRIM50Q86XT4 487 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 RHPN2Q8IUC4 686 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 FNIP1Q8TF40 1166 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 TTC25Q96NG3 672 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 RBM15Q96T37 977 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 SMARCAD1Q9H4L7 1026 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 DNAJC17Q9NVM6 304 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 KLHL11Q9NVR0 708 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 ZNF148Q9UQR1 794 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 ATF7P17544 494 aaPredicted RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 IREB2P48200 963 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 VCPP55072 806 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 POU5F1BQ06416 359 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 ERO1BQ86YB8 467 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 THNSL1Q8IYQ7 743 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
SCFD2-201ENST00000388940 FRMD8P1Q9BZ68 369 aaPredicted RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 TPX2Q9ULW0 747 aaKnown RBP15.78■□□□□ 0.12
SCFD2-201ENST00000388940 VIMP08670 466 aaKnown RBP15.77■□□□□ 0.12
SCFD2-201ENST00000388940 LACTBP83111 547 aaPredicted RBP15.77■□□□□ 0.12
SCFD2-201ENST00000388940 MBTD1Q05BQ5 628 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 MORF4L2Q15014 288 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 ZFYVE27Q5T4F4 411 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 DENND1BQ6P3S1 775 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 FHDC1Q9C0D6 1143 aaPredicted RBP15.77■□□□□ 0.12
SCFD2-201ENST00000388940 R3HDMLQ9H3Y0 253 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 WDR35Q9P2L0 1181 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 CTNNAL1Q9UBT7 734 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 AGTPBP1Q9UPW5 1226 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 NAALADL1Q9UQQ1 740 aa15.77■□□□□ 0.12
SCFD2-201ENST00000388940 ZSWIM8A7E2V4 1837 aa15.77■□□□□ 0.11
SCFD2-201ENST00000388940 SBF1O95248 1867 aa15.77■□□□□ 0.11
SCFD2-201ENST00000388940 C3orf70A6NLC5 250 aaPredicted RBP15.76■□□□□ 0.11
SCFD2-201ENST00000388940 RASSF9O75901 435 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 PGK2P07205 417 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 CREB1P16220 341 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 FAM187BQ17R55 369 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 EEF1DP3Q658K8 133 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 TXNRD3NBQ6F5E7 133 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 GLIS1Q8NBF1 620 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 CKAP2Q8WWK9 683 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
SCFD2-201ENST00000388940 CDT1Q9H211 546 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 RPF1Q9H9Y2 349 aaKnown RBP15.76■□□□□ 0.11
SCFD2-201ENST00000388940 ADARB2Q9NS39 739 aaKnown RBP15.76■□□□□ 0.11
SCFD2-201ENST00000388940 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 KCNH4Q9UQ05 1017 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 EVPLQ92817 2033 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 MCM3APO60318 1980 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 INO80B-WBP1J3KQ70 363 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 OAS1P00973 400 aaKnown RBP15.76■□□□□ 0.11
SCFD2-201ENST00000388940 KRT7P08729 469 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 CETPP11597 493 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 KRT3P12035 628 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 BRAFP15056 766 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 SCTRP47872 440 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 IFNAR2P48551 515 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 ARSEP51690 589 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 NR1H3Q13133 447 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 KCTD2Q14681 263 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 TAZQ16635 292 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 SPRED3Q2MJR0 410 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 PTPN20Q4JDL3 420 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 ZNF667Q5HYK9 610 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 EFCAB12Q6NXP0 572 aa15.76■□□□□ 0.11
SCFD2-201ENST00000388940 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms