RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 LOC102723971A0A1B0GUV8 181 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 OTOL1A6NHN0 477 aaPredicted RBP6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 E9PLN8 166 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 AREL1O15033 823 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ATXN1LP0C7T5 689 aaKnown RBP6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ACVR2AP27037 513 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ALDH9A1P49189 494 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 SLFN5Q08AF3 891 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 PUM3Q15397 648 aaKnown RBP6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 CSRP2Q16527 193 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 MGAT5BQ3V5L5 792 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZFYVE27Q5T4F4 411 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 AGAP9Q5VTM2 703 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 RRAGBQ5VZM2 374 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 SPOCD1Q6ZMY3 1216 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 LIMS2Q7Z4I7 341 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 PPP1R32Q7Z5V6 425 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZNF354CQ86Y25 554 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 C1QL4Q86Z23 238 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 SIAH1Q8IUQ4 282 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZFPM1Q8IX07 1006 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 SLC46A1Q96NT5 459 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 MNTQ99583 582 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 VKORC1Q9BQB6 163 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 STK33Q9BYT3 514 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 HEYLQ9NQ87 328 aaPredicted RBP6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 TM7SF3Q9NS93 570 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 MID2Q9UJV3 735 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 SLC39A10Q9ULF5 831 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 MTO1Q9Y2Z2 717 aaKnown RBP6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 RAD54BQ9Y620 910 aa6.45□□□□□ -1.38
RNU6-40P-201ENST00000384254 RAB27BO00194 218 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PODXLO00592 558 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 TOR1BO14657 336 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 GPR42O15529 346 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PLA2G6O60733 806 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 SOAT2O75908 522 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PRSS23O95084 383 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 IL1R1P14778 569 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 TYRP1P17643 537 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 HIBADHP31937 336 aaKnown RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 GRK6P43250 576 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 RABGGTBP53611 331 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 RNASE9P60153 205 aaKnown RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 TCF15Q12870 199 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 ARHGEF7Q14155 803 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PREPLQ4J6C6 727 aaPredicted RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 NAIF1Q69YI7 327 aaPredicted RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 GGT6Q6P531 493 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 SLC30A10Q6XR72 485 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 SYT12Q8IV01 421 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 SMAP1Q8IYB5 467 aaPredicted RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZNF808Q8N4W9 903 aaPredicted RBP6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 PSD4Q8NDX1 1056 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 OR56A1Q8NGH5 318 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 TEPSINQ96N21 525 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 HEPHQ9BQS7 1158 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
RNU6-40P-201ENST00000384254 A0A1B0GTW7 788 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 GOLGA6L3A6NEY3 463 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 CCP110O43303 1012 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 GPANK1O95872 356 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 TPH1P17752 444 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 CHRM3P20309 590 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 ITGALP20701 1170 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 ACO1P21399 889 aaKnown RBP6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 FDXRP22570 491 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 APOBEC3AP31941 199 aaPredicted RBP6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 LOXL3P58215 753 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 BIRC3Q13489 604 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 PLA1AQ53H76 456 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 FAM102AQ5T9C2 384 aaPredicted RBP6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 MYCT1Q8N699 235 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 PAGR1Q9BTK6 254 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 XYLT2Q9H1B5 865 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 MYLK2Q9H1R3 596 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 ETAA1Q9NY74 926 aa6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 RGS17Q9UGC6 210 aaPredicted RBP6.43□□□□□ -1.38
RNU6-40P-201ENST00000384254 CCDC189A1A4V9 331 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 AQP7P3A6NL99 342 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 PATE3B3GLJ2 98 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 LEFTY2O00292 366 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 TRIM24O15164 1050 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 ZNF623O75123 536 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 CSTBP04080 98 aaKnown RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 LRPAP1P30533 357 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 PXNP49023 591 aaPredicted RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 CPT1AP50416 773 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 HSD11B2P80365 405 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 CACHD1Q5VU97 1274 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 SPTY2D1Q68D10 685 aaPredicted RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 USP17L6PQ6QN14 398 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 Q6ZRM9 215 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 HTR3DQ70Z44 454 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 CLNKQ7Z7G1 428 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 GAS2L3Q86XJ1 694 aa6.42□□□□□ -1.38
RNU6-40P-201ENST00000384254 SNX27Q96L92 541 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms