RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CXCL12P48061 93 aa28.48■■■□□ 2.15
NPHP3-202ENST00000383282 CYP4F8P98187 520 aa28.48■■■□□ 2.15
NPHP3-202ENST00000383282 PLCB2Q00722 1185 aa28.48■■■□□ 2.15
NPHP3-202ENST00000383282 CEBPZQ03701 1054 aaKnown RBP28.48■■■□□ 2.15
NPHP3-202ENST00000383282 CCDC73Q6ZRK6 1079 aa28.48■■■□□ 2.15
NPHP3-202ENST00000383282 BPIFB1Q8TDL5 484 aa28.48■■■□□ 2.15
NPHP3-202ENST00000383282 CACTINQ8WUQ7 758 aaKnown RBP28.48■■■□□ 2.15
NPHP3-202ENST00000383282 MYBPHLA2RUH7 354 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 SPECC1L-ADORA2AF8WAN1 911 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 HAPLN1P10915 354 aaPredicted RBP28.47■■■□□ 2.15
NPHP3-202ENST00000383282 TDGF1P13385 188 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 IDEP14735 1019 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 SOX9P48436 509 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 CDR1P51861 262 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 TFAMQ00059 246 aaKnown RBP28.47■■■□□ 2.15
NPHP3-202ENST00000383282 TSPY1Q01534 308 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 RESTQ13127 1097 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 ALCAMQ13740 583 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 RALGPS2Q86X27 583 aaPredicted RBP28.47■■■□□ 2.15
NPHP3-202ENST00000383282 SYCP3Q8IZU3 236 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 GIPC2Q8TF65 315 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 DNAJC19Q96DA6 116 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 OLFML3Q9NRN5 406 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 THG1LQ9NWX6 298 aaKnown RBP28.47■■■□□ 2.15
NPHP3-202ENST00000383282 PCDHB5Q9Y5E4 795 aa28.47■■■□□ 2.15
NPHP3-202ENST00000383282 GPR179Q6PRD1 2367 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 TSC2P49815 1807 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 CTHP32929 405 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 KCNA1Q09470 495 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 DGKKQ5KSL6 1271 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 LRRTM3Q86VH5 581 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 BRSK2Q8IWQ3 736 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 SPEM1Q8N4L4 309 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 IL21Q9HBE4 155 aa28.46■■■□□ 2.15
NPHP3-202ENST00000383282 SYT1P21579 422 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 GARTP22102 1010 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 STAT6P42226 847 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 SATB1Q01826 763 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 CELF5Q8N6W0 485 aaKnown RBP28.45■■■□□ 2.14
NPHP3-202ENST00000383282 TTC8Q8TAM2 541 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 SAAL1Q96ER3 474 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 ZFYVE19Q96K21 471 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 LRRC3BQ96PB8 259 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 DLL3Q9NYJ7 618 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 RBAKQ9NYW8 714 aaPredicted RBP28.45■■■□□ 2.14
NPHP3-202ENST00000383282 GTSE1Q9NYZ3 720 aa28.45■■■□□ 2.14
NPHP3-202ENST00000383282 SCN1AP35498 2009 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 PRAMEF12O95522 483 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 SDHBP21912 280 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 POLR2BP30876 1174 aaKnown RBP28.44■■■□□ 2.14
NPHP3-202ENST00000383282 NFE2Q16621 373 aaPredicted RBP28.44■■■□□ 2.14
NPHP3-202ENST00000383282 RSPO4Q2I0M5 234 aaPredicted RBP28.44■■■□□ 2.14
NPHP3-202ENST00000383282 FAM173BQ6P4H8 233 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 RBM12Q9NTZ6 932 aaKnown RBP28.44■■■□□ 2.14
NPHP3-202ENST00000383282 AGAP1Q9UPQ3 857 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 FRYLO94915 3013 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 DMXL1Q9Y485 3027 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 WDR87Q6ZQQ6 2873 aa28.44■■■□□ 2.14
NPHP3-202ENST00000383282 HUS1O60921 280 aa28.43■■■□□ 2.14
NPHP3-202ENST00000383282 ITGB3P05106 788 aa28.43■■■□□ 2.14
NPHP3-202ENST00000383282 AVPR1AP37288 418 aa28.43■■■□□ 2.14
NPHP3-202ENST00000383282 USP18Q9UMW8 372 aa28.43■■■□□ 2.14
NPHP3-202ENST00000383282 MORC2Q9Y6X9 1032 aaPredicted RBP28.43■■■□□ 2.14
NPHP3-202ENST00000383282 ANK1P16157 1881 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 PRPF40AO75400 957 aaKnown RBP28.42■■■□□ 2.14
NPHP3-202ENST00000383282 DDX6P26196 483 aaKnown RBP eCLIP28.42■■■□□ 2.14
NPHP3-202ENST00000383282 MYL7Q01449 175 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 LMNB2Q03252 620 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 GAS6Q14393 721 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 TXNDC11Q6PKC3 985 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 CMTM8Q8IZV2 173 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 TMEM86AQ8N2M4 240 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 PDCL2Q8N4E4 241 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 LRRC52Q8N7C0 313 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 C1orf127Q8N9H9 656 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 NOC3LQ8WTT2 800 aaKnown RBP28.42■■■□□ 2.14
NPHP3-202ENST00000383282 SLC46A2Q9BY10 475 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 TMEM206Q9H813 350 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 PANK4Q9NVE7 773 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 ITGA11Q9UKX5 1188 aa28.42■■■□□ 2.14
NPHP3-202ENST00000383282 R3HCC1Q9Y3T6 440 aaKnown RBP28.42■■■□□ 2.14
NPHP3-202ENST00000383282 FRMD3A2A2Y4 597 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 PRR5-ARHGAP8B1AHC4 643 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 EXTL3O43909 919 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 CSH1P0DML2 217 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 CSH2P0DML3 217 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 CASP5P51878 434 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 WNT7BP56706 349 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 ARHGAP8P85298 464 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 PON2Q15165 354 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 ITPRIPL2Q3MIP1 535 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 PRR23BQ6ZRT6 265 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 CSGALNACT2Q8N6G5 542 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 LEO1Q8WVC0 666 aaPredicted RBP28.41■■■□□ 2.14
NPHP3-202ENST00000383282 ACBD6Q9BR61 282 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 PI4K2AQ9BTU6 479 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 PANK2Q9BZ23 570 aa28.41■■■□□ 2.14
NPHP3-202ENST00000383282 DDX43Q9NXZ2 648 aaKnown RBP28.41■■■□□ 2.14
NPHP3-202ENST00000383282 NUP210Q8TEM1 1887 aaPredicted RBP28.4■■■□□ 2.14
NPHP3-202ENST00000383282 GOLGA8IPA6NC78 632 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms