RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 LHX5Q9H2C1 402 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 AVENQ9NQS1 362 aaPredicted RBP15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 UVRAGQ9P2Y5 699 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 CEP83Q9Y592 693 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 CEP290O15078 2479 aa15.43■□□□□ 0.06
SYNGR1-204ENST00000381535 UQCRHLA0A096LP55 91 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 A8MXQ7 604 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 CYB561D2O14569 222 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 ATMINO43313 823 aaPredicted RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 BUB1BO60566 1050 aaPredicted RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 SRGAP2O75044 1071 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 UQCRHP07919 91 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 CDH5P33151 784 aaPredicted RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 FAAP100Q0VG06 881 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 RPS6KA1Q15418 735 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 WHAMMP3Q1A5X7 153 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 PLEKHG4Q58EX7 1191 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 MON1BQ7L1V2 547 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 DAAM2Q86T65 1068 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 ERICH1Q86X53 443 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 TOP6BLQ8N6T0 577 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 MNS1Q8NEH6 495 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 DBF4BQ8NFT6 615 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 LINC01599Q8WXQ3 324 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 DDX27Q96GQ7 796 aaKnown RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 C11orf70Q9BRQ4 267 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 DNAI2Q9GZS0 605 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 CHORDC1Q9UHD1 332 aaPredicted RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 AMFRQ9UKV5 643 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 INPP5FQ9Y2H2 1132 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 STXBP5LQ9Y2K9 1186 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 HYOU1Q9Y4L1 999 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 DNAH12Q6ZR08 3092 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 PDCD11Q14690 1871 aaKnown RBP15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
SYNGR1-204ENST00000381535 INPPL1O15357 1258 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 MICAL2O94851 1124 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 RRM1P23921 792 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 CLCNKBP51801 687 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 GRIK3Q13003 919 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 STILQ15468 1287 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 GLB1LQ6UWU2 654 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 MMS22LQ6ZRQ5 1243 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 PEX26Q7Z412 305 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 ACOT1Q86TX2 421 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 CEP112Q8N8E3 955 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 C1orf131Q8NDD1 294 aaKnown RBP15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 ZNF564Q8TBZ8 553 aaPredicted RBP15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 SENP8Q96LD8 212 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 HIPK3Q9H422 1215 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 C11orf49Q9H6J7 331 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 ABCB6Q9NP58 842 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 L1RE1Q9UN81 338 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 NME7Q9Y5B8 376 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
SYNGR1-204ENST00000381535 CASTOR2A6NHX0 329 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 TMEM110-MUSTN1A8MSY1 372 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 O00370 1275 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 CALB1P05937 261 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 FGFR1P11362 822 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 MMP8P22894 467 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 WARSP23381 471 aaKnown RBP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 CCL23P55773 120 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 PTP4A2Q12974 167 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 TUSC3Q13454 348 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 MESDQ14696 234 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 UPP1Q16831 310 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 C2CD6Q53TS8 623 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 LCLAT1Q6UWP7 414 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 CRYBG2Q8N1P7 616 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 UBA3Q8TBC4 463 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 KBTBD7Q8WVZ9 684 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 APBB2Q92870 758 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 SCLYQ96I15 445 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 UROC1Q96N76 676 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 OSBPL9Q96SU4 736 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 ELAC1Q9H777 363 aaKnown RBP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 ATP11BQ9Y2G3 1177 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 PCDHB7Q9Y5E2 793 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 ALG6Q9Y672 507 aa15.4■□□□□ 0.06
SYNGR1-204ENST00000381535 ZNF185O15231 689 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms