RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 EGFRP00533 1210 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 ITIH2P19823 946 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 MTMR2Q13614 643 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 APLFQ8IW19 511 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 NPHS2Q9NP85 383 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 E7ENQ6 273 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 FSCN2O14926 492 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 TJP3O95049 919 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 IVDP26440 423 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 PSMC5P62195 406 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 GTF2BQ00403 316 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 CYP24A1Q07973 514 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 TRMT10CQ7L0Y3 403 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 DDX1Q92499 740 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 LRRC19Q9H756 370 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 A0A0G2JND7 137 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 KRT36O76013 467 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 OATP04181 439 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 BBS9Q3SYG4 887 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 OR5B17Q8NGF7 314 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 EXOC7Q9UPT5 735 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 CHKBQ9Y259 395 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 ZNF536O15090 1300 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 ENTPD3O75355 529 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 FDX1P10109 184 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 SKIP12755 728 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 MARK3P27448 753 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 VHLP40337 213 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 NHSQ6T4R5 1651 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 EMC1Q8N766 993 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
PRPF40B-202ENST00000380281 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 MDH1BQ5I0G3 518 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 ARHGEF18Q6ZSZ5 1173 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 ANKRD23Q86SG2 305 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 GPD1LQ8N335 351 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 ENDOVQ8N8Q3 282 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SLC7A6OSQ96CW6 309 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SERPINB12Q96P63 405 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CHMP2BQ9UQN3 213 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 GSTA2P09210 222 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 TAC1P20366 129 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CPA2P48052 419 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 PGM5Q15124 567 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 PARP6Q2NL67 630 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 LIN9Q5TKA1 542 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 AGGF1Q8N302 714 aaeCLIP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CKAP2Q8WWK9 683 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CLEC4DQ8WXI8 215 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 STOML1Q9UBI4 398 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 PHTF1Q9UMS5 762 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 DNAH12Q6ZR08 3092 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CAPN9O14815 690 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CDH16O75309 829 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 KRT19P08727 400 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 FUT4P22083 530 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 SKIV2L2P42285 1042 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 IL9RQ01113 521 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 LCA5Q86VQ0 697 aa13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
PRPF40B-202ENST00000380281 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms