RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SNF8Q96H20 258 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 TPD52L3Q96J77 140 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 NRDE2Q9H7Z3 1164 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 RAVER2Q9HCJ3 691 aaKnown RBP13.82□□□□□ -0.2
HIPK3-202ENST00000379016 NMRK1Q9NWW6 199 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 ABCC12Q96J65 1359 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 MGAT4DA6NG13 374 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 VWA5AO00534 786 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 KPNA6O60684 536 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 OR1G1P47890 313 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 PPP2R2AP63151 447 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 CYP4A22Q5TCH4 519 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
HIPK3-202ENST00000379016 KAT2BQ92831 832 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 RBBP8Q99708 897 aa13.82□□□□□ -0.2
HIPK3-202ENST00000379016 RIMS2Q9UQ26 1411 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 PTPN12Q05209 780 aaKnown RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 SCAF8Q9UPN6 1271 aaKnown RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 MEI4A8MW99 385 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ATP6V1B2P21281 511 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 AP1S1P61966 158 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 GFPT1Q06210 699 aaPredicted RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 TMEM62Q0P6H9 643 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 MTHFD1LQ6UB35 978 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 CLIP3Q96DZ5 547 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 DSCC1Q9BVC3 393 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 PCDH8O95206 1070 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 NDUFA10O95299 355 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ZNF23P17027 643 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 HARS2P49590 506 aaKnown RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 CLK2P49760 499 aaKnown RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 FAPQ12884 760 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 BIKQ13323 160 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ZNF302Q9NR11 478 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 RNF112Q9ULX5 631 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ABCB11O95342 1321 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ENDOD1O94919 500 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 STARD3Q14849 445 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 TRIP10Q15642 601 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 IKBIPQ70UQ0 350 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 FAM20CQ8IXL6 584 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 AK8Q96MA6 479 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 QKIQ96PU8 341 aaKnown RBP eCLIP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 MFSD1Q9H3U5 465 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 RPS6KA6Q9UK32 745 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 EXTL3O43909 919 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
HIPK3-202ENST00000379016 IL2P60568 153 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 ENKURQ8TC29 256 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 OSCP1Q8WVF1 389 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 MCRS1Q96EZ8 462 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 RMDN3Q96TC7 470 aa13.81□□□□□ -0.2
HIPK3-202ENST00000379016 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 S100A6P06703 90 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 WARSP23381 471 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 GGCXP38435 758 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 IZUMO3Q5VZ72 239 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ATG16L2Q8NAA4 619 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 GPRASP2Q96D09 838 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 MIEF1Q9NQG6 463 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 C8orf4Q9NR00 106 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ASB14A6NK59 587 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TTLL4Q14679 1199 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ECE2O60344 883 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 RNASEH1O60930 286 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 IFNA14P01570 189 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 GPR141Q7Z602 305 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 CASP10Q92851 521 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TDRKHQ9Y2W6 561 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PRKAB2O43741 272 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 FAM171BQ6P995 826 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 FAM9CQ8IZT9 166 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
HIPK3-202ENST00000379016 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 MFAP3LO75121 409 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 RGS20O76081 388 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PODNQ7Z5L7 613 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 TRPV3Q8NET8 790 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PIGKQ92643 395 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 USP7Q93009 1102 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PHF11Q9UIL8 331 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 PDE5AO76074 875 aa13.8□□□□□ -0.2
HIPK3-202ENST00000379016 ACADLP28330 430 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms