RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 OSBPL10Q9BXB5 764 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
RAD50-201ENST00000378823 PGK2P07205 417 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CHI3L2Q15782 390 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
RAD50-201ENST00000378823 TRIM65Q6PJ69 517 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
RAD50-201ENST00000378823 KIF2BQ8N4N8 673 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CHMP2BQ9UQN3 213 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 IL18RAPO95256 599 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CD4P01730 458 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 SOAT1P35610 550 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 ACADSBP45954 432 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 SLC16A1P53985 500 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 GEMIN4P57678 1058 aaKnown RBP11.69□□□□□ -0.54
RAD50-201ENST00000378823 SMTNL2Q2TAL5 461 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
RAD50-201ENST00000378823 NMRK1Q9NWW6 199 aa11.69□□□□□ -0.54
RAD50-201ENST00000378823 ARID1BQ8NFD5 2236 aaPredicted RBP11.69□□□□□ -0.54
RAD50-201ENST00000378823 EEF2KO00418 725 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 POU4F1Q01851 419 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SPP2Q13103 211 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SLC29A2Q14542 456 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 CLEC16AQ2KHT3 1053 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 C9orf72Q96LT7 481 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SERPINB12Q96P63 405 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 NT5C1AQ9BXI3 368 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SPASTQ9UBP0 616 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 PRG3Q9Y2Y8 225 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
RAD50-201ENST00000378823 USP1O94782 785 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 NUDT2P50583 147 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 XPO6Q96QU8 1125 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 PCDHB2Q9Y5E7 798 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 DLGAP3O95886 979 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SLC44A4Q53GD3 710 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SGO1Q5FBB7 561 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 E4F1Q66K89 784 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 TFB1MQ8WVM0 346 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 ILKAPQ9H0C8 392 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 SOX11P35716 441 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 PRKCQQ04759 706 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 STX5Q13190 355 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 NCF4Q15080 339 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 IRX2Q9BZI1 471 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 GPR63Q9BZJ6 419 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 V9GYQ6 96 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 RAD51CO43502 376 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 ACADSP16219 412 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 GPR141Q7Z602 305 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 HIC2Q96JB3 615 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 PIM2Q9P1W9 311 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 PRKCBP05771 671 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 WEE2P0C1S8 567 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 ST13P50502 369 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 STAT5BP51692 787 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 AGAP9Q5VTM2 703 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 SMARCAD1Q9H4L7 1026 aa11.68□□□□□ -0.54
RAD50-201ENST00000378823 RNF17Q9BXT8 1623 aaKnown RBP11.68□□□□□ -0.54
RAD50-201ENST00000378823 PSMC3P17980 439 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 NMT1P30419 496 aaKnown RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 DPYDQ12882 1025 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 ZCWPW2Q504Y3 356 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 RSPH1Q8WYR4 309 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 FRMD8Q9BZ67 464 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 CHD4Q14839 1912 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 SNTNA6NMZ2 147 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 UBTFL6P0CB48 400 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 ZNF677Q86XU0 584 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 DDHD1Q8NEL9 900 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 E2F7Q96AV8 911 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 CCDC126Q96EE4 140 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 PDP2Q9P2J9 529 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 FBXO2Q9UK22 296 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 SOX13Q9UN79 622 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 A0A1W2PQJ5 194 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 TK2O00142 265 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 DGKIO75912 1065 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 DDI1Q8WTU0 396 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 REEP2Q9BRK0 252 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 TMEM8AQ9HCN3 771 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 SLC38A7Q9NVC3 462 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 AGAP1Q9UPQ3 857 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 TRIM66O15016 1216 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
RAD50-201ENST00000378823 DEPDC7Q96QD5 511 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
RAD50-201ENST00000378823 IGSF9BQ9UPX0 1349 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms