RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DPEP3Q9H4B8 488 aa16.81■□□□□ 0.28
CCDC107-204ENST00000378409 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
CCDC107-204ENST00000378409 NOCTQ9UK39 431 aaKnown RBP16.81■□□□□ 0.28
CCDC107-204ENST00000378409 STXBP5LQ9Y2K9 1186 aa16.81■□□□□ 0.28
CCDC107-204ENST00000378409 PCDHB12Q9Y5F1 795 aa16.81■□□□□ 0.28
CCDC107-204ENST00000378409 PTPRDP23468 1912 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 SSU72P8A0A1W2PR75 194 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 GABRDO14764 452 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 SYN3O14994 580 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 ARHGAP6O43182 974 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 AKR1B10O60218 316 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 ACAT1P24752 427 aaKnown RBP16.8■□□□□ 0.28
CCDC107-204ENST00000378409 BRD2P25440 801 aaKnown RBP16.8■□□□□ 0.28
CCDC107-204ENST00000378409 PPM1AP35813 382 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 YWHAHQ04917 246 aaPredicted RBP16.8■□□□□ 0.28
CCDC107-204ENST00000378409 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
CCDC107-204ENST00000378409 MTF1Q14872 753 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 RAD9BQ6WBX8 426 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 VPS36Q86VN1 386 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 B3GALT6Q96L58 329 aa16.8■□□□□ 0.28
CCDC107-204ENST00000378409 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
CCDC107-204ENST00000378409 MMEP08473 750 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 CHRNB2P17787 502 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 TNFAIP3P21580 790 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
CCDC107-204ENST00000378409 KIF11P52732 1056 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 PSMC1P62191 440 aaKnown RBP16.79■□□□□ 0.28
CCDC107-204ENST00000378409 CDR2Q01850 454 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 SGO2Q562F6 1265 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.79■□□□□ 0.28
CCDC107-204ENST00000378409 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 CCDC170Q8IYT3 715 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 THEM5Q8N1Q8 247 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 TFAP2BQ92481 460 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 DDX1Q92499 740 aaKnown RBP16.79■□□□□ 0.28
CCDC107-204ENST00000378409 CLP1Q92989 425 aaKnown RBP16.79■□□□□ 0.28
CCDC107-204ENST00000378409 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 PDCL3Q9H2J4 239 aa16.79■□□□□ 0.28
CCDC107-204ENST00000378409 MED7O43513 233 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 LINC00271P0C7V0 271 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 VDRP11473 427 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 MYOGP15173 224 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 FGFR3P22607 806 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 PCSK1P29120 753 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
CCDC107-204ENST00000378409 CTNNB1P35222 781 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 FMO1Q01740 532 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
CCDC107-204ENST00000378409 TAS1R1Q7RTX1 841 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 CRYBG2Q8N1P7 616 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 C12orf29Q8N999 325 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 B3GALNT2Q8NCR0 500 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 OLIG1Q8TAK6 271 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 ZNF606Q8WXB4 792 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 RTP3Q9BQQ7 232 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 ZSWIM1Q9BR11 485 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 SYT11Q9BT88 431 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 TTPALQ9BTX7 342 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 VN1R3Q9BXE9 311 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 FAM49BQ9NUQ9 324 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 ADAMTS1Q9UHI8 967 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 CDH9Q9ULB4 789 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 KIAA1257Q9ULG3 409 aa16.78■□□□□ 0.28
CCDC107-204ENST00000378409 EPN1Q9Y6I3 576 aaPredicted RBP16.78■□□□□ 0.28
CCDC107-204ENST00000378409 A0A087X0T9 212 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 LINC01553A4QN01 128 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 ATP2C2O75185 946 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 FGF18O76093 207 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 OAZ2O95190 189 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 NDUFA10O95299 355 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 EFEMP2O95967 443 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 FAM228BP0C875 321 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
CCDC107-204ENST00000378409 ANXA13P27216 316 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 GFPT1Q06210 699 aaPredicted RBP16.77■□□□□ 0.28
CCDC107-204ENST00000378409 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.28
CCDC107-204ENST00000378409 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.28
CCDC107-204ENST00000378409 USP41Q3LFD5 358 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 PASD1Q8IV76 773 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 LNX1Q8TBB1 728 aaPredicted RBP16.77■□□□□ 0.28
CCDC107-204ENST00000378409 ACBD6Q9BR61 282 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 PYCARDQ9ULZ3 195 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 PCDHA11Q9Y5I1 949 aa16.77■□□□□ 0.28
CCDC107-204ENST00000378409 O00370 1275 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.272e-13■■■■■ 35.7
CCDC107-204ENST00000378409 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
CCDC107-204ENST00000378409 SOD2P04179 222 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CA3P07451 260 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CFHP08603 1231 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 CCDC130P13994 396 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 BMPR1AP36894 532 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 TSPY1Q01534 308 aa16.76■□□□□ 0.27
CCDC107-204ENST00000378409 KRT17Q04695 432 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms