RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C1orf50Q9BV19 199 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 UNKQ9C0B0 810 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CLK4Q9HAZ1 481 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CDH16O75309 829 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF132P52740 706 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ANTXR2P58335 489 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SLC45A4Q5BKX6 768 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CYP4F22Q6NT55 531 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 KCTD4Q8WVF5 259 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PGBD4Q96DM1 585 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ANKRD34BA5PLL1 514 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 ZBED4O75132 1171 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 AKR1D1P51857 326 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 RWDD4Q6NW29 188 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 GPBP1Q86WP2 473 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TMPRSS6Q8IU80 811 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TSPAN14Q8NG11 270 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 VPS35Q96QK1 796 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SP140LQ9H930 580 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 VPS4AQ9UN37 437 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SCAF8Q9UPN6 1271 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 MROH7-TTC4A0A0A0MT08 1334 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 UFL1O94874 794 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 ANXA13P27216 316 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 FOLH1Q04609 750 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 CDC16Q13042 620 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SPDYCQ5MJ68 293 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 DHDDSQ86SQ9 333 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 ECHDC2Q86YB7 292 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 ZCCHC7Q8N3Z6 543 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 JADE3Q92613 823 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 MTMR9Q96QG7 549 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 EBF3Q9H4W6 596 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 CYP4F11Q9HBI6 524 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 NEK6Q9HC98 313 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 RPRD1BQ9NQG5 326 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 HNRNPCL2B2RXH8 293 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TFPTP0C1Z6 253 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 DHX34Q14147 1143 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SNRNP48Q6IEG0 339 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 PLEKHA8Q96JA3 519 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 FARSBQ9NSD9 589 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 VPS51Q9UID3 782 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 PREX1Q8TCU6 1659 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 A0A1W2PQ72 361 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SERPING1P05155 500 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 PRCPP42785 496 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SLC1A4P43007 532 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 AAGABQ6PD74 315 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 NCSTNQ92542 709 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 UCKL1Q9NWZ5 548 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SMG5Q9UPR3 1016 aaKnown RBP12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SLC8A2Q9UPR5 921 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 SUGT1Q9Y2Z0 365 aa12.3□□□□□ -0.44
NPHP4-202ENST00000378161 TMEM131LA2VDJ0 1609 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 KANSL1LA0AUZ9 987 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ATF2P15336 505 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 PLCG1P19174 1290 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF200P98182 395 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ACSBG2Q5FVE4 666 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 EFHC1Q5JVL4 640 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF662Q6ZS27 426 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 SPARTQ8N0X7 666 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 GRPEL2Q8TAA5 225 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ERP44Q9BS26 406 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 TLR10Q9BXR5 811 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ILVBLA1L0T0 632 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 MYO1DO94832 1006 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 GCNT3O95395 438 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 PRAMEP78395 509 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF829Q3KNS6 432 aaPredicted RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 DUS1LQ6P1R4 473 aaKnown RBP12.29□□□□□ -0.44
NPHP4-202ENST00000378161 DGKHQ86XP1 1220 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms