RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 BARHL2Q9NY43 387 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 DSG3P32926 999 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 COG2Q14746 738 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 GRM4Q14833 912 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 PRPF39Q86UA1 669 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 OR2W6PQ8NHA6 318 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 NT5DC3Q86UY8 548 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 GATAD2AQ86YP4 633 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 REXO4Q9GZR2 422 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 RUVBL2Q9Y230 463 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 COPG1Q9Y678 874 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 KIF1BO60333 1816 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 GMNCA6NCL1 334 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 GTF2E2P29084 291 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 CPT1AP50416 773 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 KLHL24Q6TFL4 600 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
RGP1-201ENST00000378078 UBTFL6P0CB48 400 aaPredicted RBP17■□□□□ 0.31
RGP1-201ENST00000378078 ZNF286BP0CG31 522 aa17■□□□□ 0.31
RGP1-201ENST00000378078 ABCE1P61221 599 aaKnown RBP17■□□□□ 0.31
RGP1-201ENST00000378078 NDEL1Q9GZM8 345 aa17■□□□□ 0.31
RGP1-201ENST00000378078 CAAP1Q9H8G2 361 aa17■□□□□ 0.31
RGP1-201ENST00000378078 SENP2Q9HC62 589 aa17■□□□□ 0.31
RGP1-201ENST00000378078 POLG2Q9UHN1 485 aa17■□□□□ 0.31
RGP1-201ENST00000378078 E9PBE3 544 aa17■□□□□ 0.31
RGP1-201ENST00000378078 INSRP06213 1382 aa17■□□□□ 0.31
RGP1-201ENST00000378078 RRN3P2A6NIE6 340 aa17■□□□□ 0.31
RGP1-201ENST00000378078 NLRP14Q86W24 1093 aa17■□□□□ 0.31
RGP1-201ENST00000378078 RGL4Q8IZJ4 473 aa17■□□□□ 0.31
RGP1-201ENST00000378078 EME1Q96AY2 570 aa17■□□□□ 0.31
RGP1-201ENST00000378078 TRPC4Q9UBN4 977 aa17■□□□□ 0.31
RGP1-201ENST00000378078 RBBP8NLQ8NC74 664 aaPredicted RBP17■□□□□ 0.31
RGP1-201ENST00000378078 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
RGP1-201ENST00000378078 HSMCR30P0CW71 290 aa17■□□□□ 0.31
RGP1-201ENST00000378078 PTK7Q13308 1070 aa17■□□□□ 0.31
RGP1-201ENST00000378078 POLD3Q15054 466 aaPredicted RBP17■□□□□ 0.31
RGP1-201ENST00000378078 MAPRE2Q15555 327 aa17■□□□□ 0.31
RGP1-201ENST00000378078 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
RGP1-201ENST00000378078 NPHP4O75161 1426 aaPredicted RBP17■□□□□ 0.31
RGP1-201ENST00000378078 USP27XA6NNY8 438 aa17■□□□□ 0.31
RGP1-201ENST00000378078 CHURC1-FNTBB4DL54 471 aa17■□□□□ 0.31
RGP1-201ENST00000378078 GMPSP49915 693 aaPredicted RBP17■□□□□ 0.31
RGP1-201ENST00000378078 KCNK10P57789 538 aa17■□□□□ 0.31
RGP1-201ENST00000378078 C16orf72Q14CZ0 275 aa17■□□□□ 0.31
RGP1-201ENST00000378078 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
RGP1-201ENST00000378078 ECSITQ9BQ95 431 aa17■□□□□ 0.31
RGP1-201ENST00000378078 LOC100653049A0A140TA62 436 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 KATNA1O75449 491 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 KRT34O76011 436 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 SERPINB3P29508 390 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 KRT20P35900 424 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 CYP51A1Q16850 503 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 M0QYT0 321 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 CCDC15Q0P6D6 951 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 PGLYRP2Q96PD5 576 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 CKMP06732 381 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 STX3Q13277 289 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 GPAT2Q6NUI2 795 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 C3orf62Q6ZUJ4 267 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 THAP11Q96EK4 314 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 RNPC3Q96LT9 517 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 RPRD1AQ96P16 312 aaPredicted RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 UBP1Q9NZI7 540 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 PAIP2BQ9ULR5 123 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 CLK1P49759 484 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 RGS4P49798 205 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 CAV1Q03135 178 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 MTF1Q14872 753 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 ARL6IP4Q66PJ3 421 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 TSPAN17Q96FV3 270 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 SERAC1Q96JX3 654 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 C9orf72Q96LT7 481 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 FAM20AQ96MK3 541 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 RNASEH1O60930 286 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 SREBF2Q12772 1141 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 RABGAP1LQ5R372 815 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 IRAK1BP1Q5VVH5 260 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 GPRC5AQ8NFJ5 357 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 RNF19AQ9NV58 838 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 CPA4Q9UI42 421 aa16.99■□□□□ 0.31
RGP1-201ENST00000378078 TRMT6Q9UJA5 497 aaKnown RBP16.99■□□□□ 0.31
RGP1-201ENST00000378078 SCAMP3O14828 347 aaKnown RBP16.98■□□□□ 0.31
RGP1-201ENST00000378078 TOMM70O94826 608 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 CNTN1Q12860 1018 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 CHI3L2Q15782 390 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 LEMD2Q8NC56 503 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 SEMA4DQ92854 862 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 FBXO32Q969P5 355 aa16.98■□□□□ 0.31
RGP1-201ENST00000378078 VTI1BQ9UEU0 232 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms