RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 ARF4P18085 180 aaPredicted RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 SFNP31947 248 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 LSP1P33241 339 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 HARS2P49590 506 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 BCAP31P51572 246 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 AP1S1P61966 158 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 LPIN1Q14693 890 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PLCL1Q15111 1095 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 C8orf34Q49A92 452 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 CYP4A22Q5TCH4 519 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 GLB1LQ6UWU2 654 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SNF8Q96H20 258 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PPP1R36Q96LQ0 422 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 TINF2Q9BSI4 451 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 LIMA1Q9UHB6 759 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PFASO15067 1338 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 EXTL3O43909 919 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 RBMXL2O75526 392 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 CHRNDQ07001 517 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 GNA13Q14344 377 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 CYP51A1Q16850 503 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 KBTBD12Q3ZCT8 623 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 NEK5Q6P3R8 708 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PIK3R5Q8WYR1 880 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 FAR2Q96K12 515 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 MOV10L1Q9BXT6 1211 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 ZNF341Q9BYN7 854 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SETBP1Q9Y6X0 1596 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 A0A1W2PRG6 482 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 E7ENQ6 273 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 ADCY6O43306 1168 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 CHI3L1P36222 383 aaPredicted RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 CSNK2BP67870 215 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 DALRD3Q5D0E6 543 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 PDZK1Q5T2W1 519 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 AGGF1Q8N302 714 aaeCLIP11.06□□□□□ -0.64
RTN3-206ENST00000377819 FAM172AQ8WUF8 416 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 WNT8AQ9H1J5 351 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 EXO5Q9H790 373 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 EVA1BQ9NVM1 165 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 NDUFA13Q9P0J0 144 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 YTHDC2Q9H6S0 1430 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 HMBSP08397 361 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 RARBP10826 455 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PCSK1P29120 753 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 NLRP11P59045 1033 aaKnown RBP11.06□□□□□ -0.64
RTN3-206ENST00000377819 CYP24A1Q07973 514 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 KCNB1Q14721 858 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SCAIQ8N9R8 606 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 SERPINB12Q96P63 405 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 TRPC4Q9UBN4 977 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
RTN3-206ENST00000377819 ANO9A1A5B4 782 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 EIF4E1BA6NMX2 242 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF500O60304 480 aaPredicted RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 TPST1O60507 370 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TIPRLO75663 272 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 SNUPNO95149 360 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 PLCG1P19174 1290 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 WARSP23381 471 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 EFNA5P52803 228 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF284Q2VY69 593 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CAMK1DQ8IU85 385 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 C18orf8Q96DM3 657 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TRABDQ9H4I3 376 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CATSPERBQ9H7T0 1116 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CMTM6Q9NX76 183 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PADI4Q9UM07 663 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CLTCQ00610 1675 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 PNMA6FA0A0J9YX94 578 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CDH16O75309 829 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 GUCY1B2O75343 617 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 MED26O95402 600 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 ARSEP51690 589 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 EIF4A1P60842 406 aaKnown RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 POLD3Q15054 466 aaPredicted RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 MSANTD1Q6ZTZ1 278 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 FAM20CQ8IXL6 584 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 GLMNQ92990 594 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 NACC2Q96BF6 587 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CRELD1Q96HD1 420 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PPCSQ9HAB8 311 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 PARVAQ9NVD7 372 aa11.05□□□□□ -0.64
RTN3-206ENST00000377819 CHORDC1Q9UHD1 332 aaPredicted RBP11.05□□□□□ -0.64
RTN3-206ENST00000377819 KIF1BO60333 1816 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms