RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 GABRQQ9UN88 632 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 UTP11Q9Y3A2 253 aaKnown RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 FAM187AA6NFU0 413 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 TMEM191CA6NGB0 347 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 POLR3GO15318 223 aaPredicted RBP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 CRYBB1P53674 252 aaPredicted RBP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 TAS2R40P59535 323 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 RPL7AP62424 266 aaKnown RBP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 TAP1Q03518 808 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 MYO1EQ12965 1108 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 HSP90B2PQ58FF3 399 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 PPP1R15BQ5SWA1 713 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 CYP4A22Q5TCH4 519 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 DDX42Q86XP3 938 aaKnown RBP eCLIP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 RHOT1Q8IXI2 618 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 NME8Q8N427 588 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 MREGQ8N565 214 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 C3orf20Q8ND61 904 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 FAM71BQ8TC56 605 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 C18orf8Q96DM3 657 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 MCEEQ96PE7 176 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 MTG1Q9BT17 334 aaPredicted RBP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 CYTH4Q9UIA0 394 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 LCMT1Q9UIC8 334 aa17.81■□□□□ 0.44
HLA-A-202ENST00000376806 BARX2Q9UMQ3 279 aaPredicted RBP17.81■□□□□ 0.44
HLA-A-202ENST00000376806 GOLGA6BA6NDN3 693 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 ZNF252P-AS1Q0IIN9 211 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 ZBTB6Q15916 424 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 ALKAL1Q6UXT8 129 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
HLA-A-202ENST00000376806 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 MAGOHBQ96A72 148 aaKnown RBP17.8■□□□□ 0.44
HLA-A-202ENST00000376806 APOL6Q9BWW8 343 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 UPF3AQ9H1J1 476 aaKnown RBP17.8■□□□□ 0.44
HLA-A-202ENST00000376806 FAM114A2Q9NRY5 505 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 PCYOX1Q9UHG3 505 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.8■□□□□ 0.44
HLA-A-202ENST00000376806 USTQ9Y2C2 406 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 O00370 1275 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 PPEF2O14830 753 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 FSCN2O14926 492 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 DAPK3O43293 454 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 MICAL2O94851 1124 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 RARAP10276 462 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 VDRP11473 427 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 PTGIRP43119 386 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 NDST1P52848 882 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 GLRA4Q5JXX5 417 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 TAF2Q6P1X5 1199 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 TTC27Q6P3X3 843 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 JAMLQ86YT9 394 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 C18orf25Q96B23 403 aaPredicted RBP17.8■□□□□ 0.44
HLA-A-202ENST00000376806 NEUROG2Q9H2A3 272 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 RASAL2Q9UJF2 1139 aa17.8■□□□□ 0.44
HLA-A-202ENST00000376806 M0QYV0 167 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 AKAP5P24588 427 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 FLT3LGP49771 235 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 GSCP56915 257 aaPredicted RBP17.79■□□□□ 0.44
HLA-A-202ENST00000376806 SP3Q02447 781 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 SGO2Q562F6 1265 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 GNASQ5JWF2 1037 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 DCUN1D2Q6PH85 259 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 KATNAL2Q8IYT4 538 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 LRRC52Q8N7C0 313 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 DPH5Q9H2P9 285 aa17.79■□□□□ 0.44
HLA-A-202ENST00000376806 HTTP42858 3142 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 AGPSO00116 658 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 SYF2O95926 243 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 GGCXP38435 758 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 FNTAP49354 379 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 FAM193AP78312 1265 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 OGDHQ02218 1023 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 KCTD19Q17RG1 926 aaPredicted RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 CCDC137Q6PK04 289 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 MAIP1Q8WWC4 291 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 ERP44Q9BS26 406 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 SAGE1Q9NXZ1 904 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 TJP2Q9UDY2 1190 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 GTF2IRD1Q9UHL9 959 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 UBQLN1Q9UMX0 589 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 PGK1P00558 417 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 HMGCRP04035 888 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 GJC1P36383 396 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 COILP38432 576 aaPredicted RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 HSPA9P38646 679 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 SSR1P43307 286 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 PRKCZQ05513 592 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 CNGA2Q16280 664 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 DUPD1Q68J44 220 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 FAM228AQ86W67 206 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 NIPA2Q8N8Q9 360 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 HEXIM2Q96MH2 286 aaKnown RBP17.78■□□□□ 0.44
HLA-A-202ENST00000376806 CPXM1Q96SM3 734 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 HERPUD2Q9BSE4 406 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 PRDM10Q9NQV6 1147 aa17.78■□□□□ 0.44
HLA-A-202ENST00000376806 GOLGA8SH3BPF8 625 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms