RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
TRIM40-206ENST00000376724 TJP2Q9UDY2 1190 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 NR2E1Q9Y466 385 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 HTTP42858 3142 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 SCN1AP35498 2009 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
TRIM40-206ENST00000376724 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 GOLGA8SH3BPF8 625 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 PROSCO94903 275 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CD4P01730 458 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 VDRP11473 427 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CTNNA2P26232 953 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CST5P28325 142 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CDH5P33151 784 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 RWDD2BP57060 319 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 GUCY2DQ02846 1103 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 SOX4Q06945 474 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 INCA1Q0VD86 236 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 PTPN20Q4JDL3 420 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 DCUN1D2Q6PH85 259 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 NAP1L3Q99457 506 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 FUT8Q9BYC5 575 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 SYNCQ9H7C4 482 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 XPOTO43592 962 aaKnown RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 GHRP10912 638 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 KCNE1P15382 129 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 GJC1P36383 396 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 SLC1A1P43005 524 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 TNNT3P45378 269 aaPredicted RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 ACLYP53396 1101 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 MGAT3Q09327 533 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 FBXO47Q5MNV8 452 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 ACOT1Q86TX2 421 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 LPPQ93052 612 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CFHR5Q9BXR6 569 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 FAM105AQ9NUU6 356 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 AMACRQ9UHK6 382 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 L1RE1Q9UN81 338 aa13.69□□□□□ -0.22
TRIM40-206ENST00000376724 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRIM40-206ENST00000376724 CCDC188H7C350 402 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 O00370 1275 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 PIRO00625 290 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 GPR182O15218 404 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 CD52P31358 61 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 MAP2K2P36507 400 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 MAP9Q49MG5 647 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
TRIM40-206ENST00000376724 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 CPXM1Q96SM3 734 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 ST7Q9NRC1 585 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 GOLGA6L10A0A0M3HER8 536 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 TMEM191CA6NGB0 347 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 PIK3R2O00459 728 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 PTGESO14684 152 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 SPTLC1O15269 473 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 HCRTO43612 131 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 INHAP05111 366 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 MLH1P40692 756 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 PSMC1P62191 440 aaKnown RBP13.68□□□□□ -0.22
TRIM40-206ENST00000376724 CNGA2Q16280 664 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 HDXQ7Z353 690 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 TTC39CQ8N584 583 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 C18orf8Q96DM3 657 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 LPIN3Q9BQK8 851 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 IP6K2Q9UHH9 426 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 PADI3Q9ULW8 664 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
TRIM40-206ENST00000376724 THSD7BQ9C0I4 1608 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 A8MXQ7 604 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 ERBB2P04626 1255 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 PDGFRBP09619 1106 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 CYP3A5P20815 502 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 TAF6P49848 677 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 AFF1P51825 1210 aaKnown RBP13.67□□□□□ -0.22
TRIM40-206ENST00000376724 TAS2R40P59535 323 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 PAK2Q13177 524 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 TRADDQ15628 312 aa13.67□□□□□ -0.22
TRIM40-206ENST00000376724 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms