RNA–Protein interactions for RNA: ENST00000376504.3

PTF1A-201, Transcript of pancreas associated transcription factor 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTF1A, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1A-201ENST00000376504 ZSWIM1Q9BR11 485 aa33.96■■■■□ 3.03
PTF1A-201ENST00000376504 NHEJ1Q9H9Q4 299 aaPredicted RBP33.96■■■■□ 3.03
PTF1A-201ENST00000376504 PCDHB12Q9Y5F1 795 aa33.96■■■■□ 3.03
PTF1A-201ENST00000376504 PDE4DIPQ5VU43 2346 aa33.96■■■■□ 3.03
PTF1A-201ENST00000376504 SSU72P8A0A1W2PR75 194 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 CAPN15O75808 1086 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 KIAA0319Q5VV43 1072 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.95■■■■□ 3.03
PTF1A-201ENST00000376504 ACOT1Q86TX2 421 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 CRYBG2Q8N1P7 616 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 TFAP2BQ92481 460 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 TMEM169Q96HH4 297 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 B3GALT6Q96L58 329 aa33.95■■■■□ 3.03
PTF1A-201ENST00000376504 LAMA2P24043 3122 aaKnown RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 CHRNB2P17787 502 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 ACAT1P24752 427 aaKnown RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 PPM1AP35813 382 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 ASTE1Q2TB18 679 aaPredicted RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 RAD9BQ6WBX8 426 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 PCDHA11Q9Y5I1 949 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 OAZ2O95190 189 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 BRD2P25440 801 aaKnown RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 YWHAHQ04917 246 aaPredicted RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 MRPL58Q14197 206 aaKnown RBP33.94■■■■□ 3.02
PTF1A-201ENST00000376504 MTF1Q14872 753 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 AGPAT1Q99943 283 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 LPIN3Q9BQK8 851 aa33.94■■■■□ 3.02
PTF1A-201ENST00000376504 RTP2Q5QGT7 225 aa33.93■■■■□ 3.02
PTF1A-201ENST00000376504 VARS2Q5ST30 1063 aaKnown RBP33.93■■■■□ 3.02
PTF1A-201ENST00000376504 TAF3Q5VWG9 929 aa33.93■■■■□ 3.02
PTF1A-201ENST00000376504 CEP57Q86XR8 500 aa33.93■■■■□ 3.02
PTF1A-201ENST00000376504 ZNF606Q8WXB4 792 aa33.93■■■■□ 3.02
PTF1A-201ENST00000376504 HEXIM2Q96MH2 286 aaKnown RBP33.93■■■■□ 3.02
PTF1A-201ENST00000376504 PUF60Q9UHX1 559 aaKnown RBP33.93■■■■□ 3.02
PTF1A-201ENST00000376504 THAP12O43422 761 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 ATP2C2O75185 946 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 MMEP08473 750 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 CD19P15391 556 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 FMO1Q01740 532 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 CDR2Q01850 454 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 DDX53Q86TM3 631 aaKnown RBP33.92■■■■□ 3.02
PTF1A-201ENST00000376504 C12orf29Q8N999 325 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 TTPALQ9BTX7 342 aa33.92■■■■□ 3.02
PTF1A-201ENST00000376504 YBX2Q9Y2T7 364 aaKnown RBP33.92■■■■□ 3.02
PTF1A-201ENST00000376504 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.92■■■■□ 3.02
PTF1A-201ENST00000376504 VDRP11473 427 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 BMPR1AP36894 532 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 PSMC1P62191 440 aaKnown RBP33.91■■■■□ 3.02
PTF1A-201ENST00000376504 SPRED2Q7Z698 418 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 ZNF677Q86XU0 584 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 B3GALNT2Q8NCR0 500 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 OR10T2Q8NGX3 314 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 LNX1Q8TBB1 728 aaPredicted RBP33.91■■■■□ 3.02
PTF1A-201ENST00000376504 TNIP3Q96KP6 325 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 SYT15Q9BQS2 421 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 ACBD6Q9BR61 282 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 HERC2P3Q9BVR0 1158 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 CHST7Q9NS84 486 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 CDH9Q9ULB4 789 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 KIAA1257Q9ULG3 409 aa33.91■■■■□ 3.02
PTF1A-201ENST00000376504 ARHGAP6O43182 974 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 FGF18O76093 207 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 SOD2P04179 222 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 CA3P07451 260 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 CFHP08603 1231 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 PCSK1P29120 753 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 PBX2P40425 430 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 PLCB3Q01970 1234 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 CCDC142Q17RM4 750 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 USP41Q3LFD5 358 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 THEM5Q8N1Q8 247 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 KLHL23Q8NBE8 558 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 CCDC42Q96M95 316 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 CRTAC1Q9NQ79 661 aa33.9■■■■□ 3.02
PTF1A-201ENST00000376504 HSFX4A0A1B0GTS1 333 aaPredicted RBP33.89■■■■□ 3.02
PTF1A-201ENST00000376504 HSFX3A0A1B0GWH4 333 aaPredicted RBP33.89■■■■□ 3.02
PTF1A-201ENST00000376504 DDX3XO00571 662 aaKnown RBP eCLIP33.89■■■■□ 3.02
PTF1A-201ENST00000376504 NRDCO43847 1150 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 PTPN1P18031 435 aaKnown RBP33.89■■■■□ 3.02
PTF1A-201ENST00000376504 CTNNB1P35222 781 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 SGO2Q562F6 1265 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 CCDC170Q8IYT3 715 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 SLC30A5Q8TAD4 765 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 TMEM209Q96SK2 561 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 PCDHB18PQ96TA0 734 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 C17orf80Q9BSJ5 609 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 PRO3102Q9H379 93 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 RWDD3Q9Y3V2 267 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 ANXA13P27216 316 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 SSTR3P32745 418 aaPredicted RBP33.89■■■■□ 3.02
PTF1A-201ENST00000376504 KIF11P52732 1056 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 HS1BP3Q53T59 392 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 GLYCTKQ8IVS8 523 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 TDHQ8IZJ6 230 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 PKMYT1Q99640 499 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 PBX4Q9BYU1 374 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 DEF6Q9H4E7 631 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 ADAMTS1Q9UHI8 967 aa33.89■■■■□ 3.02
PTF1A-201ENST00000376504 O00370 1275 aa33.88■■■■□ 3.01
PTF1A-201ENST00000376504 TNFAIP3P21580 790 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms