RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SOAT2O75908 522 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 CD2BP2O95400 341 aaKnown RBP25.04■■□□□ 1.6
C9orf47-202ENST00000375850 HAPLN1P10915 354 aaPredicted RBP25.04■■□□□ 1.6
C9orf47-202ENST00000375850 GAP43P17677 238 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 ATXN1P54253 815 aaKnown RBP25.04■■□□□ 1.6
C9orf47-202ENST00000375850 SIM2Q14190 667 aaPredicted RBP25.04■■□□□ 1.6
C9orf47-202ENST00000375850 NFE2Q16621 373 aaPredicted RBP25.04■■□□□ 1.6
C9orf47-202ENST00000375850 ITPRIPL2Q3MIP1 535 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 LPIN3Q9BQK8 851 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 KIF9Q9HAQ2 790 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 IL21Q9HBE4 155 aa25.04■■□□□ 1.6
C9orf47-202ENST00000375850 PDCP20941 246 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 TXLNAP40222 546 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 TSPY1Q01534 308 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 GRIN1Q05586 938 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 PRR23BQ6ZRT6 265 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 CMTM8Q8IZV2 173 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 LRRC3BQ96PB8 259 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 GTSE1Q9NYZ3 720 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 PCDHB5Q9Y5E4 795 aa25.03■■□□□ 1.6
C9orf47-202ENST00000375850 PPP1R37O75864 691 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 LDHAP00338 332 aaKnown RBP25.02■■□□□ 1.6
C9orf47-202ENST00000375850 SOX9P48436 509 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 AMPD2Q01433 879 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 ALCAMQ13740 583 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 CCINQ13939 588 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 WSCD1Q658N2 575 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 TXNDC11Q6PKC3 985 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 SFR1Q86XK3 245 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 SPATA18Q8TC71 538 aa25.02■■□□□ 1.6
C9orf47-202ENST00000375850 K7ESF4 209 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 PRAMEF12O95522 483 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 AVPR1AP37288 418 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 CYP4F8P98187 520 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 CRELD2Q6UXH1 353 aaPredicted RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 NETO1Q8TDF5 533 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 CACTINQ8WUQ7 758 aaKnown RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 LEO1Q8WVC0 666 aaPredicted RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 ZFYVE19Q96K21 471 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 ACCSQ96QU6 501 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 STRA6Q9BX79 667 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 SLC46A2Q9BY10 475 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 MRPL44Q9H9J2 332 aaKnown RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 ABCB6Q9NP58 842 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 PARD6AQ9NPB6 346 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 RBM12Q9NTZ6 932 aaKnown RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 ABI2Q9NYB9 513 aaPredicted RBP25.01■■□□□ 1.59
C9orf47-202ENST00000375850 PCDHB13Q9Y5F0 798 aa25.01■■□□□ 1.59
C9orf47-202ENST00000375850 CHURC1-FNTBB4DL54 471 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 TISP43B9A030 160 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 CSH1P0DML2 217 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 CSH2P0DML3 217 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 ADSSP30520 456 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 FNTBP49356 437 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 PON2Q15165 354 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 SV2BQ7L1I2 683 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25■■□□□ 1.59
C9orf47-202ENST00000375850 LRRTM3Q86VH5 581 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 EFCAB13Q8IY85 973 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 TMEM86AQ8N2M4 240 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 GIPC2Q8TF65 315 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 EXOC4Q96A65 974 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 EPSTI1Q96J88 318 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 OLFML3Q9NRN5 406 aa25■■□□□ 1.59
C9orf47-202ENST00000375850 UXTQ9UBK9 157 aaPredicted RBP25■■□□□ 1.59
C9orf47-202ENST00000375850 CCDC163A0A0D9SF12 145 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 ATG13O75143 517 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 TSC2P49815 1807 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 NLRP12P59046 1061 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 RPL10AP62906 217 aaKnown RBP24.99■■□□□ 1.59
C9orf47-202ENST00000375850 SPEM2Q0P670 501 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 BFSP1Q12934 665 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 CSRP2Q16527 193 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 L1TD1Q5T7N2 865 aaKnown RBP24.99■■□□□ 1.59
C9orf47-202ENST00000375850 RRAGBQ5VZM2 374 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 Q6ZS52 159 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 DYMQ7RTS9 669 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 WDR5BQ86VZ2 330 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 GPIHBP1Q8IV16 184 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 BRSK2Q8IWQ3 736 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 LRRC52Q8N7C0 313 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 NUP210Q8TEM1 1887 aaPredicted RBP24.99■■□□□ 1.59
C9orf47-202ENST00000375850 MRPS31Q92665 395 aaKnown RBP24.99■■□□□ 1.59
C9orf47-202ENST00000375850 FAM83CQ9BQN1 747 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 ACBD6Q9BR61 282 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 SRPRBQ9Y5M8 271 aaKnown RBP24.99■■□□□ 1.59
C9orf47-202ENST00000375850 DNAH14Q0VDD8 3507 aa24.99■■□□□ 1.59
C9orf47-202ENST00000375850 HRO43593 1189 aa24.98■■□□□ 1.59
C9orf47-202ENST00000375850 HUS1O60921 280 aa24.98■■□□□ 1.59
C9orf47-202ENST00000375850 GARTP22102 1010 aa24.98■■□□□ 1.59
C9orf47-202ENST00000375850 ZNF268Q14587 947 aaPredicted RBP24.98■■□□□ 1.59
C9orf47-202ENST00000375850 LPAL2Q16609 132 aa24.98■■□□□ 1.59
C9orf47-202ENST00000375850 VPS37CA5D8V6 355 aaPredicted RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 F11P03951 625 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 HMGA1P17096 107 aaKnown RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 TFAMQ00059 246 aaKnown RBP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 MYL7Q01449 175 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 TNK2Q07912 1038 aa24.97■■□□□ 1.59
C9orf47-202ENST00000375850 GRSF1Q12849 480 aaKnown RBP eCLIP24.97■■□□□ 1.59
C9orf47-202ENST00000375850 RUNX3Q13761 415 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms