RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
LSM2-208ENST00000375661 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 K7ESF4 209 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 M0QZQ0 153 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 HRO43593 1189 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 PPP1R37O75864 691 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 FGF19O95750 216 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 MYL1P05976 194 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 CPB1P15086 417 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 FNTBP49356 437 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 LIMK1P53667 647 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 GTF2BQ00403 316 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 YWHAHQ04917 246 aaPredicted RBP13.16□□□□□ -0.3
LSM2-208ENST00000375661 PNOCQ13519 176 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 GAS6Q14393 721 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 POSTNQ15063 836 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 TEAD2Q15562 447 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
LSM2-208ENST00000375661 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 TARS2Q9BW92 718 aaKnown RBP13.16□□□□□ -0.3
LSM2-208ENST00000375661 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 ST6GALNAC4Q9H4F1 302 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 OLFML3Q9NRN5 406 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 YIPF1Q9Y548 306 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 SPTBN2O15020 2390 aa13.16□□□□□ -0.3
LSM2-208ENST00000375661 NCANO14594 1321 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 ANK1P16157 1881 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 OR6C75A6NL08 312 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 H0YCG3 227 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 K7ENM7 598 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 TOM1L1O75674 476 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
LSM2-208ENST00000375661 GJA1P17302 382 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 LRPAP1P30533 357 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 CASP5P51878 434 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 KPNA1P52294 538 aaPredicted RBP13.15□□□□□ -0.3
LSM2-208ENST00000375661 EPHB3P54753 998 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 ZC2HC1CQ53FD0 456 aaPredicted RBP13.15□□□□□ -0.3
LSM2-208ENST00000375661 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
LSM2-208ENST00000375661 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
LSM2-208ENST00000375661 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
LSM2-208ENST00000375661 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
LSM2-208ENST00000375661 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 SPECC1L-ADORA2AF8WAN1 911 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 PAX3P23760 479 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 WEE1P30291 646 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 CTHP32929 405 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 ALDH1A3P47895 512 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 AARSP49588 968 aaKnown RBP eCLIP13.14□□□□□ -0.31
LSM2-208ENST00000375661 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 STRN3Q13033 797 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 GPR17Q13304 367 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.311e-7■□□□□ 11
LSM2-208ENST00000375661 SLC10A6Q3KNW5 377 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 FAM26FQ5R3K3 315 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 ZPBP2Q6X784 338 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 WDR5BQ86VZ2 330 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 FAM160A2Q8N612 972 aaPredicted RBP13.14□□□□□ -0.31
LSM2-208ENST00000375661 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 FAM200AQ8TCP9 573 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 CCDC34Q96HJ3 373 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 MRPL44Q9H9J2 332 aaKnown RBP13.14□□□□□ -0.31
LSM2-208ENST00000375661 TBX20Q9UMR3 447 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 EML5Q05BV3 1969 aa13.14□□□□□ -0.31
LSM2-208ENST00000375661 TSC2P49815 1807 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 CCDC163A0A0D9SF12 145 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 DPYSL4O14531 572 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 PRPF6O94906 941 aaKnown RBP13.13□□□□□ -0.31
LSM2-208ENST00000375661 VNN2O95498 520 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 CYP3A5P20815 502 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 SCP2P22307 547 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 DMWDQ09019 674 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 KCNA1Q09470 495 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 STK4Q13043 487 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 KCNB1Q14721 858 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 KYAT1Q16773 422 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 IL31Q6EBC2 164 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 CEP68Q76N32 757 aa13.13□□□□□ -0.31
LSM2-208ENST00000375661 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms