RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 PGM1P36871 562 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 YARSP54577 528 aaKnown RBP13.82□□□□□ -0.2
CUL4A-203ENST00000375441 BNIP1Q12981 228 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 PGM5Q15124 567 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 TEX2Q8IWB9 1127 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 FBXO36Q8NEA4 188 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 ZNF606Q8WXB4 792 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 ALKBH8Q96BT7 664 aaKnown RBP13.82□□□□□ -0.2
CUL4A-203ENST00000375441 TTC1Q99614 292 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 MRIQ9BWK5 157 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 FHDC1Q9C0D6 1143 aaPredicted RBP13.82□□□□□ -0.2
CUL4A-203ENST00000375441 DNAI2Q9GZS0 605 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 C10orf88Q9H8K7 445 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 PPCSQ9HAB8 311 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 MARCOQ9UEW3 520 aaPredicted RBP13.82□□□□□ -0.2
CUL4A-203ENST00000375441 SLC12A4Q9UP95 1085 aa13.82□□□□□ -0.2
CUL4A-203ENST00000375441 GSCP56915 257 aaPredicted RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 OTUD4Q01804 1114 aaKnown RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ROR1Q01973 937 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 KLC1Q07866 573 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 TFDP1Q14186 410 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 TFDP2Q14188 446 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 STXBP2Q15833 593 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 CYP4X1Q8N118 509 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 TTLL6Q8N841 843 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ACTL9Q8TC94 416 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 FAM111AQ96PZ2 611 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 PAFAH2Q99487 392 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 CCDC88AQ3V6T2 1871 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 PAPPAQ13219 1627 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 SPECC1L-ADORA2AF8WAN1 911 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 PIK3R2O00459 728 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 NVLO15381 856 aaKnown RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 KDSRQ06136 332 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 RIPK1Q13546 671 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 SURF1Q15526 300 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 RNF43Q68DV7 783 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ZBTB45Q96K62 511 aaPredicted RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 F8VP50 259 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ENO1P06733 434 aaKnown RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ACTR2P61160 394 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ZNF200P98182 395 aaPredicted RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 MAMLD1Q13495 774 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 WDR72Q3MJ13 1102 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 VSTM1Q6UX27 236 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 NUDCD3Q8IVD9 361 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 KATNAL2Q8IYT4 538 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 SPATA18Q8TC71 538 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 SPOCK2Q92563 424 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 RAB6BQ9NRW1 208 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ANGPTL2Q9UKU9 493 aa13.81□□□□□ -0.2
CUL4A-203ENST00000375441 ASTN2O75129 1339 aaPredicted RBP13.81□□□□□ -0.2
CUL4A-203ENST00000375441 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 TAC1P20366 129 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SERPINB6P35237 376 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 VCPP55072 806 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 JAG1P78504 1218 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 HIPK4Q8NE63 616 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 TRIM4Q9C037 500 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 RPF1Q9H9Y2 349 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ASNSD1Q9NWL6 643 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SAE1Q9UBE0 346 aaPredicted RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SLC24A2Q9UI40 661 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 KRT38O76015 456 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 MTA2O94776 668 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 STK10O94804 968 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ADRA1DP25100 572 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 NIPA1Q7RTP0 329 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SPIRE2Q8WWL2 714 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ZNF75CPQ92670 426 aaPredicted RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 KIAA1683Q9H0B3 1180 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 KLC2Q9H0B6 622 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 HESX1Q9UBX0 185 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 A0A1B0GUL6 1792 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 M0QYV0 167 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 RPL7AP62424 266 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 MCL1Q07820 350 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 RBBP5Q15291 538 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SMAD1Q15797 465 aaKnown RBP13.8□□□□□ -0.2
CUL4A-203ENST00000375441 TMEM154Q6P9G4 183 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 LMO3Q8TAP4 145 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 MIS12Q9H081 205 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 SEPT10Q9P0V9 454 aa13.8□□□□□ -0.2
CUL4A-203ENST00000375441 ACTL7BQ9Y614 415 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms