RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 MYL2P10916 166 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ADRA2BP18089 450 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 KCNJ2P63252 427 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SDCCAG3Q96C92 435 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CCDC68Q9H2F9 335 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PIH1D1Q9NWS0 290 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 YY1P25490 414 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TYK2P29597 1187 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SERPINB4P48594 390 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TNFAIP2Q03169 654 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CHST7Q9NS84 486 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 NCANO14594 1321 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PHRF1Q9P1Y6 1649 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CES2O00748 559 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PIAS1O75925 651 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TSTA3Q13630 321 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TFDP2Q14188 446 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 EFTUD2Q15029 972 aaKnown RBP eCLIP6.85□□□□□ -1.313e-6■■■■■ 32.7
SMC1A-202ENST00000375340 ISLR2Q6UXK2 745 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SPOCD1Q6ZMY3 1216 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ZSWIM2Q8NEG5 633 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TULP2O00295 520 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PIK3CDO00329 1044 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 APOEP02649 317 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ZCCHC18P0CG32 403 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 IL1R1P14778 569 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SERPINB5P36952 375 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 HSP90AA5PQ58FG0 334 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PSPC1Q8WXF1 523 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SLC35C1Q96A29 364 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ELMO2Q96JJ3 720 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 DNAJC18Q9H819 358 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PCDHGC5Q9Y5F6 944 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 RARGP13631 454 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 NUMBP49757 651 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 OTUD4Q01804 1114 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 KLC1Q07866 573 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 BMPR2Q13873 1038 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ANO4Q32M45 955 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SLC5A5Q92911 643 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PCDHB2Q9Y5E7 798 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 A8MXQ7 604 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 KPNA7A9QM74 516 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ANKRD63C9JTQ0 380 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ZSCAN5DPP0CG00 497 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TMEM132DQ14C87 1099 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 FAM84AQ96KN4 292 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 ZCWPW1Q9H0M4 648 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 GTF3C4Q9UKN8 822 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 CNGA3Q16281 694 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 EXOC8Q8IYI6 725 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 DNAJC19Q96DA6 116 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TIPINQ9BVW5 301 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TARS2Q9BW92 718 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 N4BP2Q86UW6 1770 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 NOL4O94818 638 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ICAM1P05362 532 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PDGFRAP16234 1089 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 TAC1P20366 129 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 RSBN1LQ6PCB5 846 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 IL1RL2Q9HB29 575 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 SENP1Q9P0U3 644 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GOLGA8QA0A0J9YX86 632 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GOLGA8OA6NCC3 632 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GOLGA8NF8WBI6 632 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 FANCGO15287 622 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GPD1P21695 349 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DRD4P21917 467 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 VHLP40337 213 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 RPS6P62753 249 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PHEXP78562 749 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DGKZQ13574 1117 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ZBTB41Q5SVQ8 909 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DDIASQ8IXT1 998 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 TRIM15Q9C019 465 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 XAB2Q9HCS7 855 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 MRPL42Q9Y6G3 142 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 P4HA2O15460 535 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PPP1R11O60927 126 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ADRB2P07550 413 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GHRP10912 638 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PMLP29590 882 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 METTL23Q86XA0 190 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ATP6V1E2Q96A05 226 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 MED15Q96RN5 788 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 CCDC88AQ3V6T2 1871 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DGAT1O75907 488 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 CCDC117Q8IWD4 279 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms