RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 MROH1Q8NDA8 1641 aa12.06□□□□□ -0.48
PTCH1-203ENST00000375274 ARHGEF28Q8N1W1 1705 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 PPLO60437 1756 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 POLBP06746 335 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM132DQ14C87 1099 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 FAXCQ5TGI0 409 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 EXD1Q8NHP7 514 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 KLRC4O43908 158 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TXNP10599 105 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 VEGFAP15692 232 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 RFC5P40937 340 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 NPTX2P47972 431 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 COPAP53621 1224 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 MCL1Q07820 350 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 Q4G0T1 1027 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 THEM5Q8N1Q8 247 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 VGLL2Q8N8G2 317 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 SHCBP1LQ9BZQ2 653 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF70Q9UC06 446 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 PYGMP11217 842 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ATXN3P54252 364 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 AMPD2Q01433 879 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 KCNT1Q5JUK3 1230 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ZBTB41Q5SVQ8 909 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 KIAA1841Q6NSI8 718 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 MTDHQ86UE4 582 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TAAR1Q96RJ0 339 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 PAFAH2Q99487 392 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 POP1Q99575 1024 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 FAM49BQ9NUQ9 324 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 PDP2Q9P2J9 529 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 SLC24A2Q9UI40 661 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 SPATA31A1Q5TZJ5 1347 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 MAGEA13PA6NCF6 341 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 AP3B1O00203 1094 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 EPHB6O15197 1021 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 KPNB1Q14974 876 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 C16orf89Q6UX73 402 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM139Q8IV31 216 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 RMDN2Q96LZ7 410 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 TMEM121Q9BTD3 319 aa12.05□□□□□ -0.48
PTCH1-203ENST00000375274 EML4Q9HC35 981 aaKnown RBP12.05□□□□□ -0.48
PTCH1-203ENST00000375274 UBA6A0AVT1 1052 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SEC24DO94855 1032 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 MYL2P10916 166 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 CHRNA5P30532 468 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 TSPY1Q01534 308 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 C4orf22Q6V702 233 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SPATA20Q8TB22 786 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ANGPT2O15123 496 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SERPINB3P29508 390 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SULT1E1P49888 294 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 TRADDQ15628 312 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ATF7IP2Q5U623 682 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 GALNT4Q8N4A0 578 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 HIC2Q96JB3 615 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SARS2Q9NP81 518 aaKnown RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 PPME1Q9Y570 386 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 RARAP10276 462 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 GFAPP14136 432 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 GARTP22102 1010 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 PTPN4P29074 926 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 MIIPQ5JXC2 388 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 SETD3Q86TU7 594 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ATXN2LQ8WWM7 1075 aaKnown RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 KRT35Q92764 455 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF669Q96BR6 464 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 DTNBP1Q96EV8 351 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 C20orf96Q9NUD7 363 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-203ENST00000375274 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
PTCH1-203ENST00000375274 TCN1P20061 433 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-203ENST00000375274 SLC20A2Q08357 652 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 TBCCQ15814 346 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 ACTL9Q8TC94 416 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 SMIM22K7EJ46 135 aa12.03□□□□□ -0.48
PTCH1-203ENST00000375274 DFFAO00273 331 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms