RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 C11orf91Q3C1V1 193 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 SLC30A9Q6PML9 568 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ANKS1BQ7Z6G8 1248 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ENDOVQ8N8Q3 282 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ZNF75CPQ92670 426 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 FAM81BQ96LP2 452 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 SYT15Q9BQS2 421 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 A0A0G2JND7 137 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GOLGA8SH3BPF8 625 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GOLGA8MH3BSY2 632 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 FGFR1P11362 822 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 UNGP13051 313 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 KRT4P19013 534 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 KLRC2P26717 231 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ADSSP30520 456 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 HSD17B4P51659 736 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 KHDC1Q4VXA5 237 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 RELL1Q8IUW5 271 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ANKMY2Q8IV38 441 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 HAUS1Q96CS2 278 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ATG4CQ96DT6 458 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 DCLRE1BQ9H816 532 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 DLGAP2Q9P1A6 1054 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 DNPEPQ9ULA0 475 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 PARP14Q460N5 1801 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 CFAP69A5D8W1 941 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 NVLO15381 856 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 BANF1O75531 89 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 IFNB1P01574 187 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 TROVE2P10155 538 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GNAT1P11488 350 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 NOP14P78316 857 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 GTF2BQ00403 316 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 CLEC4DQ8WXI8 215 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 TTC25Q96NG3 672 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 MAK16Q9BXY0 300 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 ALG13Q9NP73 1137 aaKnown RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 AVENQ9NQS1 362 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-203ENST00000374877 NMRK1Q9NWW6 199 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 STOML1Q9UBI4 398 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
CCDC40-203ENST00000374877 DNALI1O14645 258 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 ADRA1DP25100 572 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 CNGA1P29973 690 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RCN1Q15293 331 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RGS9BPQ6ZS82 235 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 CLNKQ7Z7G1 428 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RBBP8NLQ8NC74 664 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 AGBL1Q96MI9 1066 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MIPEPQ99797 713 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 C12orf65Q9H3J6 166 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 METTL5Q9NRN9 209 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 SENP1Q9P0U3 644 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 GOLGA8RI6L899 631 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 IRF6O14896 467 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MAP3K13O43283 966 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MAPTP10636 758 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 ACADSP16219 412 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 ITGB5P18084 799 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 CETN2P41208 172 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PDIA2Q13087 525 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 LMBRD2Q68DH5 695 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 DSTYKQ6XUX3 929 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MOB2Q70IA6 237 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 POMGNT1Q8WZA1 660 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 C2CD2LO14523 706 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PMM2O15305 246 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PSTPIP1O43586 416 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RFC5P40937 340 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 ZBTB16Q05516 673 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MTM1Q13496 603 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RBBP5Q15291 538 aaKnown RBP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 MAPK6Q16659 721 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 PLEKHG4Q58EX7 1191 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 LIN9Q5TKA1 542 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 B3GNT9Q6UX72 402 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC40-203ENST00000374877 RFWD2Q8NHY2 731 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 UCMAQ8WVF2 138 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
CCDC40-203ENST00000374877 TRIM11Q96F44 468 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms