RNA–Protein interactions for RNA: ENST00000374825.8

BRD2-201, Transcript of bromodomain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD2, Length 4,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-201ENST00000374825 ZNF398Q8TD17 642 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 GDPD5Q8WTR4 605 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 SCFD1Q8WVM8 642 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 DDX18Q9NVP1 670 aaKnown RBP17.54■□□□□ 0.4
BRD2-201ENST00000374825 CPSF3Q9UKF6 684 aaKnown RBP17.54■□□□□ 0.4
BRD2-201ENST00000374825 SHOC2Q9UQ13 582 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 POLBP06746 335 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 PDGFRAP16234 1089 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 PCNX4Q63HM2 1172 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 KRT35Q92764 455 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 GORASP1Q9BQQ3 440 aa17.54■□□□□ 0.4
BRD2-201ENST00000374825 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 RCCD1A6NED2 376 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 FAM167AQ96KS9 214 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 NR1H4Q96RI1 486 aaPredicted RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 KLHL25Q9H0H3 589 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 NSMCE4AQ9NXX6 385 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 NINJ2Q9NZG7 142 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 CTNNAL1Q9UBT7 734 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 MAD2L2Q9UI95 211 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 FLT1P17948 1338 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 TRPC5OSA6NMA1 111 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 ATP9BO43861 1147 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 DGKIO75912 1065 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 RASA1P20936 1047 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 BGNP21810 368 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 YWHABP31946 246 aaKnown RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 SSTR3P32745 418 aaPredicted RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 CAPRIN1Q14444 709 aaKnown RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 FAM71DQ8N9W8 422 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 MROH7Q68CQ1 1323 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 PPARGP37231 505 aaPredicted RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 MTM1Q13496 603 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 USP10Q14694 798 aaKnown RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 C16orf72Q14CZ0 275 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 EFHC2Q5JST6 749 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 POLR3FQ9H1D9 316 aaPredicted RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 GABBR1Q9UBS5 961 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 CEP152O94986 1710 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 CDK16Q00536 496 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 KRR1Q13601 381 aaKnown RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
BRD2-201ENST00000374825 RNF135Q8IUD6 432 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.53■□□□□ 0.44e-6■■■■■ 50.3
BRD2-201ENST00000374825 NLRP4Q96MN2 994 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
BRD2-201ENST00000374825 AKAP3O75969 853 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 SGPL1O95470 568 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 ZNF568Q3ZCX4 644 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
BRD2-201ENST00000374825 MRPL4Q9BYD3 311 aaKnown RBP17.52■□□□□ 0.4
BRD2-201ENST00000374825 NOD1Q9Y239 953 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 PPME1Q9Y570 386 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 GJA3Q9Y6H8 435 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 F5H423 210 aaPredicted RBP17.52■□□□□ 0.4
BRD2-201ENST00000374825 SLC37A4O43826 429 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 CLK1P49759 484 aaKnown RBP17.52■□□□□ 0.4
BRD2-201ENST00000374825 NCALDP61601 193 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 MARK2Q7KZI7 788 aaKnown RBP17.52■□□□□ 0.4
BRD2-201ENST00000374825 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.4
BRD2-201ENST00000374825 BTNL10A8MVZ5 291 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 CASP4P49662 377 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 PATL1Q86TB9 770 aaKnown RBP17.52■□□□□ 0.39
BRD2-201ENST00000374825 IFNEQ86WN2 208 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 C2orf40Q9H1Z8 148 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 DNAJC16Q9Y2G8 782 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 PCDHA10Q9Y5I2 948 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 USP32Q8NFA0 1604 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 MMP13P45452 471 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 PLEKHA7Q6IQ23 1121 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 RWDD4Q6NW29 188 aaKnown RBP17.52■□□□□ 0.39
BRD2-201ENST00000374825 TCP10LQ8TDR4 215 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 FAM217BQ9NTX9 383 aaPredicted RBP17.52■□□□□ 0.39
BRD2-201ENST00000374825 SCN3BQ9NY72 215 aa17.52■□□□□ 0.39
BRD2-201ENST00000374825 PROSCO94903 275 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 CNTFP26441 200 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 CA8P35219 290 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 NCOA4Q13772 614 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 SMAD1Q15797 465 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 TFDP3Q5H9I0 405 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 ZFP1Q6P2D0 407 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 NCAPG2Q86XI2 1143 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 DEFB107AQ8IZN7 70 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 PARD3BQ8TEW8 1205 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 PAIP1Q9H074 479 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 REXO2Q9Y3B8 237 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 SNX13Q9Y5W8 968 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 DDX3XO00571 662 aaKnown RBP eCLIP17.51■□□□□ 0.392e-9■■■□□ 17.7
BRD2-201ENST00000374825 H2AFYO75367 372 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 HLA-DRAP01903 254 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 RARAP10276 462 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 CYP11B1P15538 503 aa17.51■□□□□ 0.39
BRD2-201ENST00000374825 TBL3Q12788 808 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
BRD2-201ENST00000374825 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms