RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 EPHX2P34913 555 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 SEC24CP53992 1094 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 HUNKP57058 714 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 RIBC1Q8N443 379 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 B2RBV5 119 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 VCAM1P19320 739 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 KRT72Q14CN4 511 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM10Q9UDY6 481 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 PRKAG2Q9UGJ0 569 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 USP54Q70EL1 1684 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 VHLP40337 213 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 SESN2P58004 480 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 NME3Q13232 169 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 NAB2Q15742 525 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 Q4G0T1 1027 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 SPATA17Q96L03 361 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 PPP1R36Q96LQ0 422 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 AGPAT5Q9NUQ2 364 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 KRT16P08779 473 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 GFAPP14136 432 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SCN4BQ8IWT1 228 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 CCT7Q99832 543 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SRP72O76094 671 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 RHBDL3P58872 404 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SKOR1P84550 965 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 GRB10Q13322 594 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 CYGBQ8WWM9 190 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SIPA1L3O60292 1781 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 SPAG6O75602 509 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 MYBP10242 640 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 PSMD7P51665 324 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 DEFA1P59665 94 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 DEFA3P59666 94 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 KYNUQ16719 465 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 GPC2Q8N158 579 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 PCYOX1LQ8NBM8 494 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 PDP2Q9P2J9 529 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 UBTFL6P0CB48 400 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 UCHL3P15374 230 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 ACADSP16219 412 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 PPHLN1Q8NEY8 458 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 TSC22D4Q9Y3Q8 395 aa12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 COPG1Q9Y678 874 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-202ENST00000374747 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 PTK7Q13308 1070 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 UGP2Q16851 508 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 USP38Q8NB14 1042 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 SCFD1Q8WVM8 642 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 ARHGEF26Q96DR7 871 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 SENP7Q9BQF6 1050 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 NDFIP2Q9NV92 336 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 PPP1R3GB7ZBB8 358 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 APRTP07741 180 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 TTC23LQ6PF05 361 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 NOA1Q8NC60 698 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 SH2D3AQ9BRG2 576 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 PCMTD2Q9NV79 361 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 KLHL11Q9NVR0 708 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 SEPT3Q9UH03 358 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 XPO7Q9UIA9 1087 aaKnown RBP12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 HBP1O60381 514 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 ADORA2BP29275 332 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 LAMC2Q13753 1193 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 PLA2G4FQ68DD2 849 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 SETD3Q86TU7 594 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 C3orf20Q8ND61 904 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 NSL1Q96IY1 281 aa12.82□□□□□ -0.36
NPLOC4-202ENST00000374747 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms