RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
PTPN20-204ENST00000374346 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
PTPN20-204ENST00000374346 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 SIP14410 1827 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 hCG_1818297A0A087WSY0 165 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 SMAPO00193 183 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 WFS1O76024 890 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 GLRA2P23416 452 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 EIF4BP23588 611 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 POLR2BP30876 1174 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 RFC5P40937 340 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 ZNF132P52740 706 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 PDIA2Q13087 525 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 GRM1Q13255 1194 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 PARP6Q2NL67 630 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 ATP13A4Q4VNC1 1196 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 RNASEH2BQ5TBB1 312 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 POLNQ7Z5Q5 900 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 ERICH1Q86X53 443 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 WDR49Q8IV35 697 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 NIPA2Q8N8Q9 360 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 DENND1AQ8TEH3 1009 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 ACAD9Q9H845 621 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 BATF3Q9NR55 127 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.48
PTPN20-204ENST00000374346 MAFBQ9Y5Q3 323 aaPredicted RBP12.02□□□□□ -0.48
PTPN20-204ENST00000374346 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-204ENST00000374346 RGS20O76081 388 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 KRT7P08729 469 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ZSCAN5DPP0CG00 497 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ATP2A2P16615 1042 aaKnown RBP12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ARL4CP56559 192 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 WNT7BP56706 349 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 SURF1Q15526 300 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
PTPN20-204ENST00000374346 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.49
PTPN20-204ENST00000374346 SGSM1Q2NKQ1 1148 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 KLHL38Q2WGJ6 581 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 SPDYAQ5MJ70 313 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 DCAF15Q66K64 600 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 TLDC1Q6P9B6 456 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ATP11CQ8NB49 1132 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 PYROXD1Q8WU10 500 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 INPP5DQ92835 1189 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ERP27Q96DN0 273 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-204ENST00000374346 TEPSINQ96N21 525 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 ZNF541Q9H0D2 1346 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 CNTNAP2Q9UHC6 1331 aa12.02□□□□□ -0.49
PTPN20-204ENST00000374346 PHIPQ8WWQ0 1821 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 F8VP50 259 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ASS1P00966 412 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 GCAP28676 217 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ARL2P36404 184 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 CDKN2BP42772 138 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 CXCL9Q07325 125 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 MGAT5Q09328 741 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 TRPC3Q13507 836 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 CIAPIN1Q6FI81 312 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 PPIL6Q8IXY8 311 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ZNF280CQ8ND82 737 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 OR5B17Q8NGF7 314 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ANKRD27Q96NW4 1050 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 TCHPQ9BT92 498 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 TMEM121Q9BTD3 319 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 MYLK2Q9H1R3 596 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 LRMDAQ9H2I8 198 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 CYP39A1Q9NYL5 469 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 HNRNPCL1O60812 293 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 HARSP12081 509 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 RPA3P35244 121 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 EFNA5P52803 228 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 MOGSQ13724 837 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 STXBP2Q15833 593 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 ZC3H12AQ5D1E8 599 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 CAPN12Q6ZSI9 719 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 BRSK2Q8IWQ3 736 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 GLIS1Q8NBF1 620 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 RSAD2Q8WXG1 361 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 PRCCQ92733 491 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
PTPN20-204ENST00000374346 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 HAPLN2Q9GZV7 340 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 NRBP2Q9NSY0 501 aa12.01□□□□□ -0.49
PTPN20-204ENST00000374346 DOCK1Q14185 1865 aa12□□□□□ -0.49
PTPN20-204ENST00000374346 TROVE2P10155 538 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms