RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 KYAT3Q6YP21 454 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 RNF111Q6ZNA4 994 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 TSHZ1Q6ZSZ6 1077 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 NLRX1Q86UT6 975 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 SFR1Q86XK3 245 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 PRPF31Q8WWY3 499 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
PRPF4-201ENST00000374198 UNC45AQ9H3U1 944 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF180Q9UJW8 692 aa13.58□□□□□ -0.24
PRPF4-201ENST00000374198 ARHGAP10A1A4S6 786 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 MARCH6O60337 910 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 STK10O94804 968 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 SLC12A3P55017 1021 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 COG7P83436 770 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PPIDQ08752 370 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 NCOA4Q13772 614 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 MYLK3Q32MK0 819 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 Q6ZNX1 250 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 CCDC89Q8N998 374 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PYDC1Q8WXC3 89 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 ZFRQ96KR1 1074 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 INTS2Q9H0H0 1204 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 ADAMTS6Q9UKP5 1117 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 WDR46O15213 610 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 TPD52L2O43399 206 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 TRMUO75648 421 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PEX2P28328 305 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 SLC5A2P31639 672 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 GYG1P46976 350 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 FOLH1Q04609 750 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 ZNF746Q6NUN9 644 aaPredicted RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 TCP10LQ8TDR4 215 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 BTBD9Q96Q07 612 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PIGSQ96S52 555 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 MPHOSPH6Q99547 160 aaKnown RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 NUP85Q9BW27 656 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 PSMC3IPQ9P2W1 217 aaPredicted RBP13.57□□□□□ -0.24
PRPF4-201ENST00000374198 SLC24A2Q9UI40 661 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 LZTS1Q9Y250 596 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
PRPF4-201ENST00000374198 SPECC1L-ADORA2AF8WAN1 911 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 H0YIN7 160 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 TM9SF1O15321 606 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 MAFGO15525 162 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 LPIN1Q14693 890 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 SLC5A5Q92911 643 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 ALG13Q9NP73 1137 aaKnown RBP13.56□□□□□ -0.24
PRPF4-201ENST00000374198 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 BMT2Q1RMZ1 405 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 ARMCX6Q7L4S7 300 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 CROCCP3Q8IVE0 287 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 GSTCDQ8NEC7 633 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 DQX1Q8TE96 717 aaKnown RBP13.56□□□□□ -0.24
PRPF4-201ENST00000374198 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 HERPUD2Q9BSE4 406 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 MRPS26Q9BYN8 205 aaKnown RBP13.56□□□□□ -0.24
PRPF4-201ENST00000374198 GRIP2Q9C0E4 1043 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
PRPF4-201ENST00000374198 C12orf65Q9H3J6 166 aaKnown RBP13.56□□□□□ -0.24
PRPF4-201ENST00000374198 VPS37BQ9H9H4 285 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 PPCSQ9HAB8 311 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 TAGLN3Q9UI15 199 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
PRPF4-201ENST00000374198 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 ALDH2P05091 517 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 TSPY3P0CV98 308 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 TSPY8P0CW00 308 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 PSMC2P35998 433 aaKnown RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 HIRAP54198 1017 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 KDSRQ06136 332 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 CHRNDQ07001 517 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 PRKD1Q15139 912 aaPredicted RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 DALRD3Q5D0E6 543 aaKnown RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 C3orf62Q6ZUJ4 267 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 TMC7Q7Z402 723 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 RIN3Q8TB24 985 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
PRPF4-201ENST00000374198 DYNLL2Q96FJ2 89 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 AGAP3Q96P47 875 aa13.55□□□□□ -0.24
PRPF4-201ENST00000374198 PLK2Q9NYY3 685 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms